Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal10g1161 ATGACATCGTTCTACATTGTGGCTGACCTTACCTGCTGGCAATTATTTTTGTGTTTAGGATTTACAAGGGTTGCTGGTGAGGTTTTTGGCATGTTGATTACAGTCTTGTTCATCCAAGAGGCTATCAAAGGAATGGTAAGTGAGTTTATTGCTCCCAAAGAGGAAGATCCAACATTGGACAAGTACCAATTTCATTGGCTGTATGCAAATGGATTGTTGGGTATTATATTCACCTTTGGCCTTGTTTATACTGCTTTAAAAAGCAGAAGCGCAAGGTCATGGTTATATGGAACAGGATCATTGAGAAGTTTCACTGCAGACTATGGGGTTCCTTTAATGGTAGTGGTGTGGACATTGCTATCATTCATTACTACTTCAAAGAAAGTGCCTTCTGGAGTTCCAAGAAGGCTCATTGCCCCTCTAGCTTGGGAACCTGCATCTTTACACCATTGGACAGTTATCAAAGATATGGGAAAGGTTTCTCCAACCTATATTTTCGCTGCTTTTATTCCAGCCATTATGGTAGCCGGGCTTTACTTCTTTGACCACAGTGTTGCTTCTCAGCTAGCACAACAGAAGGAGTTCAATCTAAAGAAACCTTCTGCATATCACTATGATATTTTGTTGCTAGGGTTCACGACTTTGCTTTGTGGACTTATTGGGTTACCACCTGCAAATGGAGTTTTGCCTCAATCCCCTATGCACACCAAGAGTTTATCTGTTCTCAAGAGACAGTTGATCCGAAAAAAGATGGTTAAAAGTGCGAAGGAAAGCATAAGGCGCAAAGCTAGCAATGCTGAAATATACGGGAACATGCAAGAAGTGTTTATAGAAATGGATAAAAGCATAAATAAACACTTAGTTGCCAGAGAACTGGAGGATTTGAAAGAAGTTGTCCTAAATGCTGAAGATAAAGGAGACAACAAAGAGAATACATTTGATCCAGAGAAACACATTGATGCACATCTTCCAGTTAGGGTAAACGAGCAAAGAGTGAGCAATCTGTTGCAGTCAGTACTCGTAGGCGCATCGGTTTTCGCAATGCCGGCCATAGTAAAGATACCAACTTCAGTTCTGTGGGGATACTTTGCATACATGGCCATTGATAGTCTTCCTGGGAATCAATTCTGGGAAAGGATACTAATTCTCTTTGTAGCACCTAATAGGCGTTACAAACCTAAACATCTAATGGAATTGGATGCTGCTGAATATGAAGAAATACTTGGTGCTCCAAAAACTAGTTTATCTTTCATGGATTTGGATTCACCTTCAAGAGAAATGGAAGATGGAGAAATATTGGATGAGTTAACTACTAATAGAGGAGAATTGAAAGTCAGAAATGTTAGCACTAGTGAGGAAAGAAAGAACCAGGTTCATCATCTTGAAAATGATGGGGAAAAATGA 1404 0.3996 MTSFYIVADLTCWQLFLCLGFTRVAGEVFGMLITVLFIQEAIKGMVSEFIAPKEEDPTLDKYQFHWLYANGLLGIIFTFGLVYTALKSRSARSWLYGTGSLRSFTADYGVPLMVVVWTLLSFITTSKKVPSGVPRRLIAPLAWEPASLHHWTVIKDMGKVSPTYIFAAFIPAIMVAGLYFFDHSVASQLAQQKEFNLKKPSAYHYDILLLGFTTLLCGLIGLPPANGVLPQSPMHTKSLSVLKRQLIRKKMVKSAKESIRRKASNAEIYGNMQEVFIEMDKSINKHLVARELEDLKEVVLNAEDKGDNKENTFDPEKHIDAHLPVRVNEQRVSNLLQSVLVGASVFAMPAIVKIPTSVLWGYFAYMAIDSLPGNQFWERILILFVAPNRRYKPKHLMELDAAEYEEILGAPKTSLSFMDLDSPSREMEDGEILDELTTNRGELKVRNVSTSEERKNQVHHLENDGEK 467
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal10g1161 467 MobiDBLite consensus disorder prediction 443 467 - -
Lal10g1161 467 Coils Coil 285 312 - -
Lal10g1161 467 Pfam HCO3- transporter family 325 391 IPR011531 GO:0006820|GO:0016021
Lal10g1161 467 Pfam HCO3- transporter family 69 245 IPR011531 GO:0006820|GO:0016021
Lal10g1161 467 PANTHER BORON TRANSPORTER 4-RELATED 391 462 - -
Lal10g1161 467 PANTHER BORON TRANSPORTER 4-RELATED 21 392 - -
Lal10g1161 467 PANTHER ANION EXCHANGE PROTEIN 391 462 IPR003020 GO:0005452|GO:0006820|GO:0016020
Lal10g1161 467 PANTHER ANION EXCHANGE PROTEIN 21 392 IPR003020 GO:0005452|GO:0006820|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal10g1161 Lal-Chr10 18259014 18261739 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal10g1161 391 463 Antiporters AT1G15460 53.947 4.89e-15 75.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal10g1161 K24194 - gmx:100811184 627.861
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal10g1161 10 18259014 18261739 Lal10g1161 10 18259014 18261739 ECH
Lal10g1161 10 18259014 18261739 Lal8g0220 8 1463703 1469304 LSH