Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal10g1160 ATGGAGAGCTTAAAAACACCTTTCAAGGGTATTGTAGACGATATTCGAGGAAGAGCAGTGCATTATAAAGAAGATTGGACTTCAGCTCTCTCTTCAGGATTTGGGATATTGGCTCCAACTACATATATTTTCTTTGCTTCTGCTCTTCCTGTCATTGCCTTCGGTGCGCAGCTTAGTAGAGAGACAGATGGAAGCTTGAGCACAGTAGAAACATTGGCATCTACAGCAATTTGTGGAATCATACACTCAATTATTGGGGGTCAACCTCTCCTAATAGTAGGAGTTGCAGAACCCACTATCATCATGTATACATATTTGTACAACTTTGCTAAACATAGGGCTGATTTAGGAAGTGAACTCTTTTTACCTTGGGCAGGATGGTAA 384 0.4089 MESLKTPFKGIVDDIRGRAVHYKEDWTSALSSGFGILAPTTYIFFASALPVIAFGAQLSRETDGSLSTVETLASTAICGIIHSIIGGQPLLIVGVAEPTIIMYTYLYNFAKHRADLGSELFLPWAGW 127
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal10g1160 127 Gene3D Helical hairpin bin 18 60 - -
Lal10g1160 127 PANTHER ANION EXCHANGE PROTEIN 3 127 IPR003020 GO:0005452|GO:0006820|GO:0016020
Lal10g1160 127 PANTHER BORON TRANSPORTER 3 127 - -
Lal10g1160 127 Pfam HCO3- transporter family 7 112 IPR011531 GO:0006820|GO:0016021
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal10g1160 Lal-Chr10 18256961 18258156 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal10g1160 1 127 Antiporters AT1G74810 68.504 3.00e-60 194
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal10g1160 K24194 - gmx:100811184 225.328