Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal10g1150 ATGAAGAAAGAAAAGAGTGTTACTTTGACCGCTTTAGAGCTCCCTGGTCGACTGACTCGCTCTCAAGCTGCTTCCTTTTCTGAATCTAGACAGTTGCCCCCTTTGAAGGGCGTAACGCAACGAAATCAGAAGCAATCTAAAGGAGTCAATCCAAAAAGACCAGTCTCAGATAATACACGCCTTGGACGTAAAAGGAAGGGTGTTCTTCAGGATGTCACTAACATTAGCTGTGAAAATACTTACAGTAGCTGTTTCAATGCAACTAAAATTCAGACTAAGAAAAGCAAGTTGATTATGGCTGCTCAACTTAATGATTCCAATGTGATTCAGTCAGATGCTATGGAGCAACCACAAATTCAAGTTGGCTCAAATGCAAATGGTTTACTCGAAACAGGGCTTAGATCAGAAGATGTTACGTGCTCCGCGAGTTTGCAACGCAATGCACTTGACAGTCAGTCATCTGGAATATCTGCTCAGACATTAATTTCTCGAAAGAAAGGCCTTCTCAATGTCAACACATGCGCCAAACTTCCTAAAACAATCTTTACCAGCTTTCCTATAGTAGTTGTACAAGTTGTTGAAGCCAAGAGAGGTAACCTTTCTGGAGCTCCAAATATAGCAGAGGATCCAGATGTCACTGATATAGATGCTGATTTTGAAGATCCTCTATTTTGCTCCATCTATGTTGATGATATCTATGACAATTTACGTGTTGCTGAGCTGTCAAGAAGGCCTTATCCCCACTTTATGGAAACAATACAGCGAGATATCAATCAAACCATGCGCGGGGTACTGGTTGATTGGCTCGTAGAGGTTTCTGAGGAATACAAATTGGTACCAGACACTCTTTACCTAACTGTTTATCTCATAGATTGGTTTCTCTCCAAAAATTACATCGAAAGACAAAGACTGCAGCTACTTGGCATCACCTGCATGTTAATCGCTTCGAAATATGAAGAAATTAATGCCCGGCGCATTGAAGAATTCTGCTTTATCACAGACAACACGTACACAAAAGAGGAGGTATTGAAAATGGAGATTCAAGTGTTAAAGTCCGCTGCCTATCAACTCTTTGCTCCCACCATAAAAACTTTCCTCAGGAGGTTTCTTCGAGCGGCACAAGCTTCTTACAAGGGACCTAGCTTTGAATTGGAGTACCTGGGCAACTATCTAGCTGAACTAACACTGATGAACTATGATTTCTTAAATTTCTTTCCTTCTATGATTGCTGCTTCTGCTGTATTTCTTGCAGGATGGACATTAGATCAGTCAAACCACCCATGGAATCCAACTCTTCAACACTATGCTGGTTACAAAGCATCAGACCTGAAATTGGCAGTTCTTGCATTACAGGATATGCAGCTGAATACCAATGGCTGCCCCTTAATCGCCATACGGACAAAGTACAGGCAAGAAAAGTTTAAATGTGTAGCATCTTTGTCTTCTTCAAAACTACAGGATGCTCTATTCTGA 1473 0.4121 MKKEKSVTLTALELPGRLTRSQAASFSESRQLPPLKGVTQRNQKQSKGVNPKRPVSDNTRLGRKRKGVLQDVTNISCENTYSSCFNATKIQTKKSKLIMAAQLNDSNVIQSDAMEQPQIQVGSNANGLLETGLRSEDVTCSASLQRNALDSQSSGISAQTLISRKKGLLNVNTCAKLPKTIFTSFPIVVVQVVEAKRGNLSGAPNIAEDPDVTDIDADFEDPLFCSIYVDDIYDNLRVAELSRRPYPHFMETIQRDINQTMRGVLVDWLVEVSEEYKLVPDTLYLTVYLIDWFLSKNYIERQRLQLLGITCMLIASKYEEINARRIEEFCFITDNTYTKEEVLKMEIQVLKSAAYQLFAPTIKTFLRRFLRAAQASYKGPSFELEYLGNYLAELTLMNYDFLNFFPSMIAASAVFLAGWTLDQSNHPWNPTLQHYAGYKASDLKLAVLALQDMQLNTNGCPLIAIRTKYRQEKFKCVASLSSSKLQDALF 490
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal10g1150 490 SUPERFAMILY Cyclin-like 360 481 IPR036915 -
Lal10g1150 490 SUPERFAMILY Cyclin-like 220 356 IPR036915 -
Lal10g1150 490 SMART cyclin_7 364 452 IPR013763 -
Lal10g1150 490 SMART cyclin_7 267 351 IPR013763 -
Lal10g1150 490 Gene3D - 245 358 - -
Lal10g1150 490 PANTHER CYCLINS 45 490 IPR039361 -
Lal10g1150 490 MobiDBLite consensus disorder prediction 20 53 - -
Lal10g1150 490 PANTHER CYCLIN-A2-4 45 490 - -
Lal10g1150 490 MobiDBLite consensus disorder prediction 1 65 - -
Lal10g1150 490 Pfam Cyclin, N-terminal domain 231 356 IPR006671 -
Lal10g1150 490 CDD CYCLIN 360 450 IPR013763 -
Lal10g1150 490 PIRSF Cyclin_A_B_D_E 16 489 IPR039361 -
Lal10g1150 490 Pfam Cyclin, C-terminal domain 360 482 IPR004367 -
Lal10g1150 490 SMART Cyclin_C_2 360 483 IPR004367 -
Lal10g1150 490 CDD CYCLIN 261 350 IPR013763 -
Lal10g1150 490 Gene3D - 231 479 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal10g1150 Lal-Chr10 18187165 18198679 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal10g1150 1 490 Core Cell Cycle Gene Families AT1G80370 50.800 3.35e-163 468
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal10g1150 K06627 - gmx:100793657 602.823
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal10g1150 10 18187165 18198679 Lal10g1150 10 18187165 18198679 ECH