Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal10g1142 ATGGGTATGAACAACAATAGAGTAGAACACTTTGATTGCCATGACCAACAACAATTTCAAACCATCATCAAAATCACACAACATCAACAACAACAAGAACTAGATATAGCAATGGAAATTCACAAGGTTGAGTTGCCTCCACAAAGAACCACACTCCACAAACTAAAACAAAGACTTTCTGAAATATTCTTCCCAGATGATCCTTTCTACCGTTTCAAGAATCAATCATGTTTCATGAAGTTCATTTTAGGACTTCAATACATATTCCCTATATTCCAATGGGGCCCTCAATACAACTTTCACCTTCTTCGATCTGATGCTATCTCTGGACTCACTATTGCTAGTCTTGCCATTCCTCAGGGAATCAGTTATGCAAAGCTTGCAAACTTGCCACCTATTGTTGGATTATATTCAAGTTTTGTGCCTCCATTGATATATTCTCTGCTTGGGAGTTCTAAACATCTTGGTGTTGGTCCAGTTTCAATTGCATCTTTAGTCATGGGATCAATGTTAAGTGAAACAGTTTCTTTCACTCAAGACCCAATTCTATATCTCAAATTGGCTTTCACTGCCACTTTCTTCGCTGGTGTATTCCAAGCCTCTTTGGGTCTATTAAGGTTAGGATTTGTGATTGATTTTCTATCAAAGGCAACACTGGTGGGTTTCATGGCTGGTGCTGCAGTAATAGTTTCACTGCAGCAGCTGAAAGGATTACTTGGAATAGTGCACTTTACCACCAAGATGCAAATAGTTCCTGTACTCATCTCTGTTTTCAAGCAAAGAGACGAGAGCTTAAGGAAACCAAAACTATTCTGGGTTTCAGCAGCTGCACCATTAACATCGGTTATTTTGTCAACCATCTTAGTTTTCCTTCTGAGAAACAAGACTCATAAAATAGCAATTATAGGGAATTTACCAAAGGGCCTTAATCCACCATCATCAAACATGTTATATTTCAATGGTCCTTTCTTGGCTCTTGCTATCAAAACTGGCCTTGTCACTGGGATCTTATCTCTCACTGAAGGAATTGCAGTAGGTAGAACATTTGCAGCACTTAAGAACTACCAAGTTGATGGAAACAAAGAAATGATGGCTATTGGCCTTATGAACATTGCTGGCTCCTGTTCTTCATGCTATGTTACAACAGGATCATTTTCTAGATCAGCTGTTAACTATAATGCTGGAGCACAGACAACAGTTTCAAATATAATAATGGCTGCAGCAGTTCTAGTGACTCTTCTGTTTCTCATGCCTTTGTTTCATTATACACCAAATGTTGTCTTAGCAGCAATTATCATCACTGCTGTGATTGGGCTAATAGATTATCAAGCTGCATTTAAATTGTTGAAGGTTGATAAACTTGATTTCTTGGCATGTTTGTGCTCCTTTTTCGGGGTTCTGTTCATTTCAGTACCCGTAGGCCTCGGTATTGCGGTTGCAATATCAGTCTTCAAGATCCTGCTTCATGTCACAAGACCAAACATTTTGGTTTTGGGAAATATACCAGGAACACAAATATTCCACAATGTTAACCAATACAAAGAAGCTTCAAGAGTTCCTTCATTTCTCATTTTGGGGGTTGAGTCTCCAATCTATTTTGCTAATTCAACTTACCTTCAAGAAAGGATACTGAGATGGGTTCGAGAAGAGGAAGAACGTATAAAAGCAAATAATGGAAGTTCATTGAAGTGCATAATTTTAGACATGACAGCTGTCACAGCCATAGACACAAGTGGACTTGACACTTTATGTGAACTTAGAAAGATGCTGGAGAAAAAACTACTTAAGCTAGTGTTGGCAAATCCTGTGGGAAATGTGATGGAAAAGTTACACCAGTCAAAAAATTTGGATGAGCTTGGATTAAAAGGAATCTATCTCACAGTGGGAGAAGCTGTAGCTGACATTTCATCATCATGGAAAGCTCAACCATGA 1932 0.3856 MGMNNNRVEHFDCHDQQQFQTIIKITQHQQQQELDIAMEIHKVELPPQRTTLHKLKQRLSEIFFPDDPFYRFKNQSCFMKFILGLQYIFPIFQWGPQYNFHLLRSDAISGLTIASLAIPQGISYAKLANLPPIVGLYSSFVPPLIYSLLGSSKHLGVGPVSIASLVMGSMLSETVSFTQDPILYLKLAFTATFFAGVFQASLGLLRLGFVIDFLSKATLVGFMAGAAVIVSLQQLKGLLGIVHFTTKMQIVPVLISVFKQRDESLRKPKLFWVSAAAPLTSVILSTILVFLLRNKTHKIAIIGNLPKGLNPPSSNMLYFNGPFLALAIKTGLVTGILSLTEGIAVGRTFAALKNYQVDGNKEMMAIGLMNIAGSCSSCYVTTGSFSRSAVNYNAGAQTTVSNIIMAAAVLVTLLFLMPLFHYTPNVVLAAIIITAVIGLIDYQAAFKLLKVDKLDFLACLCSFFGVLFISVPVGLGIAVAISVFKILLHVTRPNILVLGNIPGTQIFHNVNQYKEASRVPSFLILGVESPIYFANSTYLQERILRWVREEEERIKANNGSSLKCIILDMTAVTAIDTSGLDTLCELRKMLEKKLLKLVLANPVGNVMEKLHQSKNLDELGLKGIYLTVGEAVADISSSWKAQP 643
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal10g1142 643 ProSiteProfiles STAS domain profile. 512 635 IPR002645 -
Lal10g1142 643 PANTHER SLC26A/SULP TRANSPORTER-RELATED 264 643 - -
Lal10g1142 643 PANTHER SLC26A/SULP TRANSPORTER-RELATED 36 263 - -
Lal10g1142 643 SUPERFAMILY SpoIIaa-like 517 634 IPR036513 -
Lal10g1142 643 CDD STAS_SulP_like_sulfate_transporter 513 628 - -
Lal10g1142 643 Pfam Sulfate permease family 103 460 IPR011547 GO:0016021
Lal10g1142 643 ProSitePatterns SLC26A transporters signature. 132 153 IPR018045 GO:0008271|GO:0008272
Lal10g1142 643 Gene3D STAS domain 492 637 IPR036513 -
Lal10g1142 643 Pfam STAS domain 513 631 IPR002645 -
Lal10g1142 643 PANTHER SULFATE TRANSPORTER 36 263 IPR001902 GO:0015301|GO:0016020|GO:0055085
Lal10g1142 643 PANTHER SULFATE TRANSPORTER 264 643 IPR001902 GO:0015301|GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal10g1142 Lal-Chr10 18132022 18137035 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal10g1142 1 643 Inorganic Solute Cotransporters AT3G15990 72.305 0.0 976
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal10g1142 K17471 - gmx:100812617 1038.1
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal10g1142 10 18132022 18137035 Lal8g0234 8 1585033 1590934 LSH
Lal10g1142 10 18132022 18137035 Lal1g1274 1 14124886 14132018 PCT
Lal10g1142 10 18132022 18137035 Lal18g0190 18 1560631 1565544 PCT
Lal1g1274 1 14124886 14132018 Lal10g1142 10 18132022 18137035 PCT
Lal18g0190 18 1560631 1565544 Lal10g1142 10 18132022 18137035 PCT