Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal10g1140 ATGGATGCCATTGAAGATGATGATGATACAAGGTATCACCCCCACCAAGGTTACGGTTATATGCATCATTGGAAACCTACTTTGAGGGTTTCTCCATTTTATGAGCCATTAGGAAATGATTATGGAGAAGATGATAATAATGACGGTGAGGAAGGGATACGGGAAGAGGATGAAGATGATGAGGATGATGTTGGTCAAACTAATATTCAGACTTATGACAAGCATGTCGATGACAATGAAGGTGAGGAGGAATACAATGCAAATGGGGGTAGTTATGAAAATTGTGATGATAGTGGTGATGATAGTGACGGTGGTGAGGATGATGATGATGATAGTGGTGACGACGATGATGAAAAGCAGAAAGGTTATATAATGGAGATTGATAATGACGTAGAGTGCCAACCAAAGAAGCAAAAGCTCAAGAGTTTGATTTCAACTTATGAATTTGCGCCCCATGTGCCAGCACCATCAACTTCAGCTCCCTCAGTTCCTAAACCATCTTTTGATAGGAATTCCCTTGCTGACTGGACTGAGCATGAGACATTTGTTCTTCTTGATGTATTGGCTGATTGGTTTCTTCAACGTGGAAGTAAGAGTCTTCAATTAGAGGAATGGCAAGAAGTTGCAGAAAAGGTATCAAAAGTTTCAAGCATGGAAAGGACGGATACTCAGTGTAGACACCATCTAAATACATTGAAGAAAAAATACGAAAAGGAGAAGGTTAGATGTCGAGAAATGAATGATGGAGCTAGCAAATGGGTTTATTTTAAAAGGATGGATAAGATAATGTCTTCTTCACCACAACAAGCAGGTCTCTCTTGTGGTTTGAACTCCGAAGAGTATGTTTCTACAAACTCTAGAATTTATTCAGATCGTACAAATGGATTGGATGAAACGAGGAGTAGTCCTCAGAATACAAAATCTACCGGTGACGAAGGTTCAGATGGGCCTCATGCAAAGAGAGGAAAAAAGGGAAGGGACAGTGGTGAAGCTTCTTCCTTCAGATTACTTGCAGATTCCCTTCATAAATTCAGTAACGTATATGAGAAGATAGAAAATGATAGACGGCATCAGATGGTGGAATTGGAAAAGATGAGAATGGATTTCCAGAAGGAAATAGAAACAGAGAGGCGGCATATTTTAGAAAAATTGCAGAACGAGATTTCGAAACTAGAGCAGACAGATGACGAGAGTGATGGTTCTTCTGAGAACGTTACACATACTCTTTTAGTTGGGGCATTTTTGAGACCACAAAAAGACAGAAATGCATAA 1272 0.397 MDAIEDDDDTRYHPHQGYGYMHHWKPTLRVSPFYEPLGNDYGEDDNNDGEEGIREEDEDDEDDVGQTNIQTYDKHVDDNEGEEEYNANGGSYENCDDSGDDSDGGEDDDDDSGDDDDEKQKGYIMEIDNDVECQPKKQKLKSLISTYEFAPHVPAPSTSAPSVPKPSFDRNSLADWTEHETFVLLDVLADWFLQRGSKSLQLEEWQEVAEKVSKVSSMERTDTQCRHHLNTLKKKYEKEKVRCREMNDGASKWVYFKRMDKIMSSSPQQAGLSCGLNSEEYVSTNSRIYSDRTNGLDETRSSPQNTKSTGDEGSDGPHAKRGKKGRDSGEASSFRLLADSLHKFSNVYEKIENDRRHQMVELEKMRMDFQKEIETERRHILEKLQNEISKLEQTDDESDGSSENVTHTLLVGAFLRPQKDRNA 423
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal10g1140 423 Gene3D - 173 249 - -
Lal10g1140 423 MobiDBLite consensus disorder prediction 1 16 - -
Lal10g1140 423 MobiDBLite consensus disorder prediction 391 423 - -
Lal10g1140 423 ProSiteProfiles Myb-like domain profile. 176 233 IPR001005 -
Lal10g1140 423 MobiDBLite consensus disorder prediction 1 119 - -
Lal10g1140 423 MobiDBLite consensus disorder prediction 288 330 - -
Lal10g1140 423 PANTHER OS01G0718900 PROTEIN 65 404 - -
Lal10g1140 423 PANTHER TRIHELIX TRANSCRIPTION FACTOR ASIL2 65 404 IPR044823 -
Lal10g1140 423 Pfam Myb/SANT-like DNA-binding domain 175 262 IPR044822 -
Lal10g1140 423 MobiDBLite consensus disorder prediction 313 330 - -
Lal10g1140 423 MobiDBLite consensus disorder prediction 288 312 - -
Lal10g1140 423 MobiDBLite consensus disorder prediction 41 66 - -
Lal10g1140 423 Coils Coil 359 401 - -
Lal10g1140 423 MobiDBLite consensus disorder prediction 96 116 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal10g1140 Lal-Chr10 18123871 18126305 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal10g1140 309 407 Trihelix Transcription Factor Family AT3G14180 36.538 6.23e-10 58.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Lal10g1140 Myb_DNA-bind_4 1.7e-16 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal10g1140 - - lang:109342851 525.013
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal10g1140 10 18123871 18126305 Lal10g1140 10 18123871 18126305 ECH
Lal25g0281 25 1943929 1945540 Lal10g1140 10 18123871 18126305 LSH
Lal10g1140 10 18123871 18126305 Lal8g0236 8 1596239 1597420 LSH