Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal10g1137 ATGCCCAAGAAAATCCAAAAAACCCTTCATGATTACATCTCCAAGATCAAAACCTATCACCACCCACAAATTCAATTACCCTTTCACTCATTACCCTTTTCTAAGGGTTGGATTCTCTCAGGATGCAAGCATCCAAAGACACCTTCTTTTGCCTTAGAGGGTAGAAATGAAACTCATGATGATGGAAGCAATAGCAGCAACAGCAACAGCAACAACAACAACAACAGCGATCATAAGGATGATGCAGCAGCAACACTAGCTGATGTTGATCGTTTCCTCTTGGAAAACTTCAAATCTCTATACCTCAAAGATGATGATGGCGGTGATGAAGATAATGGAAATAGATACAAAAATACTAGAAGGGTTTTCTTAGAAAATCAAAGCCATGGTGAAGAAGGACCAAAACTAGGTCCTATGTTGTTTGATTCAACAAGGTTGTTGGAAATGCCACGTGATCTTTGTGGCTCCACTAGATTTTTCGTGAAGCCAGGGTTCTCAGGATCACTAATGGTAGATGATGCAATGACAAGCATGACAACAACGCCAACAAAAATATCTGATCATGATGAAACAGGTTCGACCGCAACCTCAACCACAACCGTAATAACTGTCAACGATTCATCATCAAAGGAGGGTGTTAACATGGAAAAGACAAGACTTCCAGATAATTGCATTGCCCTATTGTCATGCTCACCAAACCCATATGAAGAATTTAAGCGTTCAATGAAAGAGATGGTGGAAACAAGAGCAAGGAACCATGAAGGTGAGATTGATTGGGAGTTCATGGAGGATTTATTGTTTTGTTATCTAAATCTGAATGAGAAGAAGTCACACAAGTTCATTCTTAGTGCTTTTGTGGATATTATCACTGTGATGCGTCAGAATTCGGAGTCAGGGACTATGATCAAGGTGAAGCCACATAGTGTTCGAACTGTGATGATTAGAAGAAAGGTGAACAAATAA 963 0.3977 MPKKIQKTLHDYISKIKTYHHPQIQLPFHSLPFSKGWILSGCKHPKTPSFALEGRNETHDDGSNSSNSNSNNNNNSDHKDDAAATLADVDRFLLENFKSLYLKDDDGGDEDNGNRYKNTRRVFLENQSHGEEGPKLGPMLFDSTRLLEMPRDLCGSTRFFVKPGFSGSLMVDDAMTSMTTTPTKISDHDETGSTATSTTTVITVNDSSSKEGVNMEKTRLPDNCIALLSCSPNPYEEFKRSMKEMVETRARNHEGEIDWEFMEDLLFCYLNLNEKKSHKFILSAFVDIITVMRQNSESGTMIKVKPHSVRTVMIRRKVNK 320
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal10g1137 320 MobiDBLite consensus disorder prediction 61 80 - -
Lal10g1137 320 ProSiteProfiles OVATE domain profile. 227 291 IPR006458 -
Lal10g1137 320 PANTHER TRANSCRIPTION REPRESSOR OFP14 3 303 - -
Lal10g1137 320 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 3 303 IPR038933 GO:0045892
Lal10g1137 320 MobiDBLite consensus disorder prediction 49 80 - -
Lal10g1137 320 TIGRFAM A_thal_3678: uncharacterized plant-specific domain TIGR01568 226 291 IPR006458 -
Lal10g1137 320 Pfam Transcriptional repressor, ovate 231 290 IPR006458 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal10g1137 Lal-Chr10 18096613 18097575 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Lal10g1137 Ovate 1.2e-22 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal10g1137 - - lja:Lj3g3v0160750.1 274.633
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal10g1137 10 18096613 18097575 Lal10g1137 10 18096613 18097575 ECH
Lal10g1137 10 18096613 18097575 Lal8g0238 8 1604840 1605821 LSH
Lal10g1137 10 18096613 18097575 Lal20g1190 20 16372184 16374084 PCT
Lal10g1137 10 18096613 18097575 Lal18g0187 18 1535802 1538449 PCT
Lal20g1190 20 16372184 16374084 Lal10g1137 10 18096613 18097575 PCT
Lal18g0187 18 1535802 1538449 Lal10g1137 10 18096613 18097575 PCT