Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal10g1128 ATGATGGCAGGGAACTCTAACTGGTGGAACATGCATCCACCTTCTTTGATCCCTCCTCAATATGTGCTTGGATCTTCTTCAATTCCTTTCAATTCTTTGGCAGAAAATCAAGACCCTCCTCAATCATGGAGTCAACTGCTTTTCACTGGATTACCAGGGGAAGAAGAAAGGATGGGTCTGAGTCATTTTCAAACTAAAAAGTTGGAAAACTGGGATGACCAAACTCTTGATCCATCTTCAAGAGTTCCTATTTTTGATGTGATAAACCAAGAAGTGTCCCAAAGTGGCAATTTGTATGGCCATGAGCATGATAAATTTCAGTCTGCTGGCTCATCTTGGTCACAAATGGTTCCAATATTTTCCCCTATGTCTTGTGTCACTACTAGCTTGAGTAGTAATAATATATTGGACTTCACTTATAACAATGTAGACCAGAGGAAGATTAATCAATTTCCAGATCAATCATATGAGTGTAATAGCACTGCCCTTGTTGGAATCAGTAATAAGAAGGCTAGGGTTCAGCAATCTTCAAGCCAACCACCTCTAAAGGTGAGGAAGGAGAAGCTAGGTGATAGAATAACAGCCCTTCACCAACTAGTTTCTCCATTTGGAAAGACTGACACAGCTTCTGTGTTGTTAGAAGCCATTGGATATATAAGATTCCTGCAGGCTCAAATTGAGGCACTCAGCTCTCCTTACTTGGACAATGCATCAAAAAACATGAGGAATCAACCTTATGACAAAAATGACCTTCATTGCATGTACTTGAAGATAAACAACATACAGGTACATGTAGAAAGAAATTCTGTATTTCCTGAGGACCCCGGTCAGCTGTTGGATGACAATGGCCTAAAAAGGAAGGGAGCTCCATACCCGGATGGAGAAGATGAAGCAAAGGACTTGAGGAGTAGAGGGTTGTGCTTGGTTCCTGTGTCTTGCACCCAACATGTTGGAAGTGAAAATGGTGCTGTTTATTGGGCACCTTCATATGGCACTGGATTTTAA 1005 0.4129 MMAGNSNWWNMHPPSLIPPQYVLGSSSIPFNSLAENQDPPQSWSQLLFTGLPGEEERMGLSHFQTKKLENWDDQTLDPSSRVPIFDVINQEVSQSGNLYGHEHDKFQSAGSSWSQMVPIFSPMSCVTTSLSSNNILDFTYNNVDQRKINQFPDQSYECNSTALVGISNKKARVQQSSSQPPLKVRKEKLGDRITALHQLVSPFGKTDTASVLLEAIGYIRFLQAQIEALSSPYLDNASKNMRNQPYDKNDLHCMYLKINNIQVHVERNSVFPEDPGQLLDDNGLKRKGAPYPDGEDEAKDLRSRGLCLVPVSCTQHVGSENGAVYWAPSYGTGF 334
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal10g1128 334 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 10 321 - -
Lal10g1128 334 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 173 222 IPR011598 GO:0046983
Lal10g1128 334 MobiDBLite consensus disorder prediction 272 298 - -
Lal10g1128 334 Gene3D - 183 245 IPR036638 GO:0046983
Lal10g1128 334 PANTHER OS05G0228400 PROTEIN 10 321 - -
Lal10g1128 334 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 183 234 IPR036638 GO:0046983
Lal10g1128 334 CDD bHLH_AtbHLH_like 183 230 IPR045239 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal10g1128 Lal-Chr10 18054844 18059858 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal10g1128 33 278 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G29100 41.219 1.10e-41 147
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal10g1128 - - gmx:100802121 474.937
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal10g1128 10 18054844 18059858 Lal10g1128 10 18054844 18059858 ECH