Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal10g1112 ATGAAAATGAAAAGCAAAGAAGCAGTTTTTGTAATCTTTGCATTTGTGTTGTTGGCATGGGGGGATGCACAAGACACTACCCTTGTTCCTGCAATCATAACATTTGGTGACTCTGCAGTTGATGTTGGGAATAATGACTATCTCCTCACTCTTTTCAAGGCTAACTACCCTCCTTATGGAAGGGATTTTCTCAACCATAAACCCACTGGGAGGTTTTGCAATGGGAAGTTAGCTACTGATCTTACTGCTGAAACACTTGGTTTTAAGAGTTATGCACCTGCATATCTTAGCCCTCAGGCATCAGGGAAGAACCTCCTTATTGGAGCAAACTTTGCTTCAGCTGCCTCTGGTTATGATGAAAAGGCTGCTCTTTTGAATCATGCAATACCATTGTCCCAACAGTTAAATTATTACAAGGAATACAAAAGCAAATTGGCCAAAGTAGCTGGTACTAAAAAAGCAGCATCAATTATCAAGGATGCATTGTACATACTAAGTGCTGGAAGTAGTGACTTTGTGCAAAATTATTATGTCAATCCTTTGATCAACAAAGTGGTCACTCCTGATCAGTATTCTTCATACCTTGTGGGTGCATTCTCAAGTTTCATTAAGGACTTGTATAAATTGGGAGCCAGGAAAGTTGGAGTAACTTCACTCCCACCATTGGGTTGCTTACCTGCTGCAAGGACTTTATTTGGTTTCCATCAGAATGGTTGTGTCTCAAGAATCAACAATGATGCCCAAGGATTTAACAAGAAGATAAATTCAGCTGCAACAAGTCTCCAAAAGCAACTTCCGGGTCTTAAGATTGTTGTCTTTGATATTTATAAGCCTCTCTATGACCTTGTTCAATCCCCTTCAAAATCTGGCTTTGTGGAGGCAAGGAAAGGTTGTTGTGGTACTGGTACTGTAGAGACAACATCCTTATTGTGCAATCCAAAATCACTAGGAACATGTTCTAATGCAACTCAGTATGTGTTTTGGGACAGTGTCCATCCTTCAGAAGCTGCTAACCAAGTTCTAGCTGATGCATTGATTGTACAAGGCATAGTCCTTATCACATAA 1065 0.4019 MKMKSKEAVFVIFAFVLLAWGDAQDTTLVPAIITFGDSAVDVGNNDYLLTLFKANYPPYGRDFLNHKPTGRFCNGKLATDLTAETLGFKSYAPAYLSPQASGKNLLIGANFASAASGYDEKAALLNHAIPLSQQLNYYKEYKSKLAKVAGTKKAASIIKDALYILSAGSSDFVQNYYVNPLINKVVTPDQYSSYLVGAFSSFIKDLYKLGARKVGVTSLPPLGCLPAARTLFGFHQNGCVSRINNDAQGFNKKINSAATSLQKQLPGLKIVVFDIYKPLYDLVQSPSKSGFVEARKGCCGTGTVETTSLLCNPKSLGTCSNATQYVFWDSVHPSEAANQVLADALIVQGIVLIT 354
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal10g1112 354 CDD SGNH_plant_lipase_like 30 346 IPR035669 -
Lal10g1112 354 PANTHER GDSL-LIKE LIPASE/ACYLHYDROLASE 2 353 - -
Lal10g1112 354 SUPERFAMILY SGNH hydrolase 32 345 - -
Lal10g1112 354 Pfam GDSL-like Lipase/Acylhydrolase 32 344 IPR001087 GO:0016788
Lal10g1112 354 PANTHER GDSL ESTERASE/LIPASE EXL3 2 353 - -
Lal10g1112 354 Gene3D SGNH hydrolase 21 348 IPR036514 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal10g1112 Lal-Chr10 17939562 17948119 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal10g1112 30 346 Pollen Coat Proteome AT1G75910 36.250 7.09e-65 207
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal10g1112 - - gmx:100795716 635.95
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal10g1112 10 17939562 17948119 Lal10g1112 10 17939562 17948119 ECH
Lal10g1112 10 17939562 17948119 Lal20g1123 20 15527627 15530744 PCT
Lal10g1112 10 17939562 17948119 Lal1g1340 1 15171123 15173776 PCT
Lal20g1123 20 15527627 15530744 Lal10g1112 10 17939562 17948119 PCT
Lal1g1340 1 15171123 15173776 Lal10g1112 10 17939562 17948119 PCT