Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal10g1108 ATGGCCACTGTACCAGGACAACTGATTTGGGAGATCGTGAAGAAGAACAACTCTTTCTTGGTGAAGGAGTTTGGTAGAGGCACTCAAAGTGTGGAATTTAGCAGAGAGTCTAATAATCTCTATAATCTCAACTCTTACAAATTCTCTGGTTTAGCGAACAAGAAAACTGTTACTGTCCAGCCTGCTGGTAAAGATCAGTCTGTGTTGTTGGCAACTACCAAGACAAAGAAACAAAACAAACCTTCTGCTTTAGTTCACAAATCTATTTTGAAGAAGGACTTCAGGAGGACCGCAAAGGCAGTGCAAAATCAGGTGGCCGATAACTACTACAGGCCTGATTTGAAGAAGGCAGCTCTTGCAAGGTTGAGTGCTGTGAATAGGAGCCTCAGAGTTGCCAAGTCTGGTGCAAAGAAGAGAAACAGGCAAGCTGTCAGCAAGTGA 441 0.4354 MATVPGQLIWEIVKKNNSFLVKEFGRGTQSVEFSRESNNLYNLNSYKFSGLANKKTVTVQPAGKDQSVLLATTKTKKQNKPSALVHKSILKKDFRRTAKAVQNQVADNYYRPDLKKAALARLSAVNRSLRVAKSGAKKRNRQAVSK 146
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal10g1108 146 Gene3D - 6 133 - -
Lal10g1108 146 PANTHER 60S RIBOSOMAL PROTEIN L28-1-LIKE 1 144 - -
Lal10g1108 146 PANTHER 60S RIBOSOMAL PROTEIN L28 1 144 IPR002672 GO:0003735|GO:0005840|GO:0006412
Lal10g1108 146 Pfam Ribosomal L28e protein family 8 128 IPR029004 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal10g1108 Lal-Chr10 17915006 17917627 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal10g1108 1 143 Cytoplasmic Ribosomal Protein Gene Family AT4G29410 76.224 5.73e-78 226
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal10g1108 K02903 - gmx:100500189 262.692
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal10g1108 10 17915006 17917627 Lal10g1108 10 17915006 17917627 ECH