Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal10g1101 ATGAAAGCTAAGACAATGGAGGAAAAGCCTAAGCTCCTTCATGGAACAATTGAAGCTACTATTTTTAATGCCACACCTTATTCACCTTCATTTCCCTTAAATTGTATATGTGCAAATGGAAAGCCTGCTTATGTGACTATCAAGATAGGCAACAAGAAGGTGGCAAAAACAACCGAAGAACGCGAACGTGTATGGAACCAAACCTTCCAGATTCAATGTGCTCATCCAGGTGATTCAACTATCACCATTACATTGAAAACATCATGCTCCATGTTGGGAAAATTCCATATCCAGGCTCAGCAGTTGAGGGAAGGAAGTTTGATCAATGGTTTCTTCCCTCTCCAAGTGGATAATGGAAAACCGAACACACGACAAAAATTAAGGTTTATATTATGGTTCAAGCCAGCAGAATTGGAACCAAGTTGGACAAAGCTACTAAGAAATGGAGAATTTCAAGGGCTGAGGAATGCTACATTCCCACAAAGGTCTAATTGTCAGGTTAAGCTATATCATGATGTTCACCATTCATCTTCTTTTCAACCTCCCTTTGATCTAATTGGAGCTCCAAGAAATCTATGGGAGGATGTTTATAAAGCCATTGAGGATGCAAAGTATTTAATTTATATTGCAGGCTGGTCCTTCAATCCCAAGATAGTTTTGGTAAATATAATTTCATTTCATTATCTTCTTTTGAAAAATGATGCTGCAGAGTTAGAAAAAAATAGCAAGAATTTCGACAGAATATCCGGGCGATCTTCGGATGGAATAAAAGTGGTTAGAGATCCCCAAACTGAAATCCCACATGCTAGAGAAGTGAAGTTGGGTGAGCTACTGAAGAAGAAATCAGAGGAAGGAGTGGCTGTGAGGGTTATGATTTGGGATGATGAAACATCTTTGCCTTTTATAAAAAACAAAGGTGTGATGAACACACACGATGAAGATGCATTTTCTTACTTCAAACACACCAAAGTAATATGCAGAAAGTGTCCCAGATTGCACCATAAGTTCCCCACACTCTTTGCTCACCATCAGAAGACTATAACTGTGGACACTAGAGTACACAATTCTGTTAATGAAAGAGAAATTATGAGCTTTCTGGGTGGTGTAGATTTGTGTGATGGAAGGTATGATACAGAGAAACATTCACTATTTCATACACTTGATAAGGAATCACAATACGAAGACTTCTACCAGACAAACATTGCAGGAGCTAGCCTCAACAAAGGAGGGCCAAGAGAGCCTTGGCATGATGCTCATGCTTGTGTTACTGGTGAGGCTGCTTGGGATGTTTTAACTAATTTTGAGCAAAGATGGACAAAACAATGCGATCCTTCCCTTCTAGTCCCCGCAAACACCTTAGGAAATCTTGTTCCTAGGACTAGCTCAAGCACTCTCTCAGAAAGGGATTGGAAAGTTCAAGTATACAGGTCAATTGACCATGTGTCTGCAAGCCAGTTGTTTAGAAAGCTAACTGTAGAGAGAAGCATTCATGAAGCTTATGTTGAAGCTATTAGGCGCGCCGATAGGTTTATATATATTGAGAACCAATATTTCATTGGAGGGTGCCATTTTTGGGAGAAAGACAAGTATAGTGGCTGCACAAATCTGATTCCTATTGAGATTGCACTCAAGGTGGTAAGCAAGATTAAAGCGAAAGAGAGGTTTGCAGTGTACATAGTAATACCGATGTGGCCAGAAGGAGTGCCTGAAAGTGAACCAGTTCAAGATATACTGCATTGGACTAGAGAAACAATGATAATGATGTATAGGTTGATTGGAGAAGCATTACAAGAAAGTGAAGAACAAGGGCACCCTAGAGATTACTTGAATTTCTTCTGCCTTGCAAATAGGGAACAAAAGAAGGAAGGGGAGTATCTTCCTCCACATTCTCCTCATCATGAAACACAATACTGGAATGCACAAAAAAATAGGAGGTTCATGGTTTATGTTCATTCCAAGCTCATGATAGGATCAGCCAATGTGAACCAAAGATCAATGGATGGACAAAGGGACACTGAGATTGCAATAGGGTGCTACCAGTCTAAAGATTATGGAGCTGATAACCAAATTGCAGATGGTGATATTCATGCATATAGAATGTCACTATGGTATGAACATACAGGTAGTGCTGATAAATTGTTCTTAGAGCCAGAAAGTAGAGAATGTGTGCAGAGAATGAAGTCTATAGGAGATAAAATGTGGAAAATGTACAATGATGAAGAAATTGTTGATATGGAAGGTGTGCACCTTGTAACATACCCTATGAATGTAACAAAAGAAGGGTCTGTGAAGGACCTAAGTAATGGAGGGGAACATTTTCCTGATACAAAGTCTCTAGTGAAGGGGAACAGAGCTAAACTGTTACCACCTATCTTTACCACTTAG 2385 0.3958 MKAKTMEEKPKLLHGTIEATIFNATPYSPSFPLNCICANGKPAYVTIKIGNKKVAKTTEERERVWNQTFQIQCAHPGDSTITITLKTSCSMLGKFHIQAQQLREGSLINGFFPLQVDNGKPNTRQKLRFILWFKPAELEPSWTKLLRNGEFQGLRNATFPQRSNCQVKLYHDVHHSSSFQPPFDLIGAPRNLWEDVYKAIEDAKYLIYIAGWSFNPKIVLVNIISFHYLLLKNDAAELEKNSKNFDRISGRSSDGIKVVRDPQTEIPHAREVKLGELLKKKSEEGVAVRVMIWDDETSLPFIKNKGVMNTHDEDAFSYFKHTKVICRKCPRLHHKFPTLFAHHQKTITVDTRVHNSVNEREIMSFLGGVDLCDGRYDTEKHSLFHTLDKESQYEDFYQTNIAGASLNKGGPREPWHDAHACVTGEAAWDVLTNFEQRWTKQCDPSLLVPANTLGNLVPRTSSSTLSERDWKVQVYRSIDHVSASQLFRKLTVERSIHEAYVEAIRRADRFIYIENQYFIGGCHFWEKDKYSGCTNLIPIEIALKVVSKIKAKERFAVYIVIPMWPEGVPESEPVQDILHWTRETMIMMYRLIGEALQESEEQGHPRDYLNFFCLANREQKKEGEYLPPHSPHHETQYWNAQKNRRFMVYVHSKLMIGSANVNQRSMDGQRDTEIAIGCYQSKDYGADNQIADGDIHAYRMSLWYEHTGSADKLFLEPESRECVQRMKSIGDKMWKMYNDEEIVDMEGVHLVTYPMNVTKEGSVKDLSNGGEHFPDTKSLVKGNRAKLLPPIFTT 794
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal10g1101 794 Gene3D Endonuclease Chain A 266 465 - -
Lal10g1101 794 PANTHER PHOSPHOLIPASE D ALPHA 8 222 - -
Lal10g1101 794 PANTHER PHOSPHOLIPASE D ALPHA 256 794 - -
Lal10g1101 794 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 338 375 IPR001736 GO:0003824
Lal10g1101 794 Pfam C2 domain 43 114 IPR000008 -
Lal10g1101 794 SUPERFAMILY Phospholipase D/nuclease 148 448 - -
Lal10g1101 794 PIRSF PLD_plant 233 794 IPR011402 GO:0004630|GO:0005509|GO:0016020|GO:0046470
Lal10g1101 794 PIRSF PLD_plant 2 227 IPR011402 GO:0004630|GO:0005509|GO:0016020|GO:0046470
Lal10g1101 794 Gene3D Endonuclease Chain A 489 686 - -
Lal10g1101 794 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 12 120 IPR035892 -
Lal10g1101 794 Pfam Phospholipase D C terminal 711 783 IPR024632 -
Lal10g1101 794 SUPERFAMILY Phospholipase D/nuclease 469 722 - -
Lal10g1101 794 PANTHER PHOSPHOLIPASE D 256 794 IPR015679 -
Lal10g1101 794 PANTHER PHOSPHOLIPASE D 8 222 IPR015679 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal10g1101 Lal-Chr10 17875379 17878421 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal10g1101 35 794 Phospholipase D Gene Family (Wang group) AT1G55180 60.256 0.0 959
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal10g1101 K01115 - gmx:100807431 1285.78
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal10g1101 10 17875379 17878421 Lal10g1101 10 17875379 17878421 ECH
Lal10g1101 10 17875379 17878421 Lal1g1358 1 15407774 15411577 PCT
Lal1g1358 1 15407774 15411577 Lal10g1101 10 17875379 17878421 PCT