Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal10g1096 ATGGCATCTTCATCTTCATCTTCCTATGGTGTTACTCAAATCAAATATGATGTCTTTATTAGCTTTAGGGGCACAGATATACGATATGGTTTTCTTAGCCATTTGAAAAAGGAACTAAAGCAGAAACAGGTTGATGCTTTTGTAGATGATAGGCTTGAGAGTGGGGATGAAATATCACCTGCACTTGTAAAAGCCATTGAACAATCACTTATTTCTTTGATCATTTTCTCAAAAGACTATGCTTCTTCAAAGTGGTGCTTGGAAGAGCTTGTCAAAATAGTTGAGTGCATGGCAAGGAATAAACAAATTGTTCTTCCAGTTTTCTATAATGTTGATCCATCTGATGTACGCTATCAGAAAGGGACTTATGGAGATGCATTTGCTATACATGAGAAAAATAAGAGGAAGTTGTCCAAGTTGCAAAATTGGAGATCTGCTTTGAATATAGCTGCTAATCTTTCTGGATTTCATTCATCAAAATTTGGGGATGAAGTTGAGCTTATAGAAGAAGTTGTGAAATGTTTGTTGGCAAGGTTGAATCTTATGTACCAAAGTGAGTTAACAGACCTTGTTGGAATTGAAGAACGGATTGCAGATATAGAGTCACTATTGTTCCTGACATCGACAATAGATGTACGTGTGATTGGGATTTGGGGCATGGGGGGTATTGGTAAAACAACAATTGCAGCTGCAGTATTTAACCGTTTGTGTTTTGAGTATGAAGGGTGTTGCTTTATGGCAAACATAAGAGAAGAATCAGAGAAACATGGCACCATTTCATTGAAGAATAAAATTCTCTCAATACTATTAAAGGAAAATGATCTATATATCAGTACGCCTAATGGAGTTCCTCCTTATGTAAAGAGAAGGCTGCTTCGCATAAAGGTTCTTGTTGTTCTTGATGATATTAATGACTCTGAGCAGCTAGAGAATTTAGTTGGTGAACTTGATTGGTTCGGACCCGGTAGTAGAATCATTGTGACAACTAGAGATAAACAAGTGCTTGGTAAAAGAGTTGATAGTATCTATGAGGCTAAGGCATTAAATTTTGATGAAGCTGTTAAGCTTTTCATTTTGAATGCCTTCAAACAAATTAGTTGTCTTGACATGGAATGGATTGAGCTATCAAGAAAAGTGATTCAGTATGCTAATGGAAATCCATTAGCTTTAAAAGTTTTGGGCTCTTTTCTTTACGGTAAAACGAAAATAGAGTGGGAAAGTCAATTGCAAAAACTTAAGAAAATGCCTCATGCAAAAATTCAGAATGTTTTGAGATTGACTTTTGATAAGTTGGATAGGGAAGAGAAGAACATATTTCTATATGTTGCATGTTTTCTGAAGGGATATGAATCACACCGAATAATAGTTCTGCTTGATGCTTGTGGTTTCTCAACAATCATTGGGCTAAGAGTCCTTCAAGATAAAGCCCTTATAGTTGAAGCCAAGGGATCAGGAAGATCAATTGTATCAATGCATGATTTGATACAAGAAATGGGCTGGGAGATAGTTAGAGAAGAATCTATTGACGACCCTGGAAAACGCAGCAGGCTATGGGATCCTAGTGATATTCATCAAGTATTGAAAAATAACACAAATCTTCAACATTTAAAGAAAATTGACCTCAGTAATTCCAAACATTTGCTAGAGCTACCAGATTTTTCAAAGGCCACAAATCTTGAAGAAATAGAACTATCTGGTTGCAGAAATTTGCTTAATGTTCATCCATCTATATTATCCCTCCACAAGCTTGTAAGATTAAACCTGTTTTTTTGCAAAGCACTCACCAGTATTCGAAGCGATACTCATTTAAGATCCCTCCGTGATCTCTTCCTCGGTGGTTGCTCAAGGCTCAAGGAGTTTTCACTGACTTCAGAAAATATGAAAGACTTGAACTTAAATTCAACTGCTATCAATGAATTGCCATCATCAATTGGGAGACTAAAAAAACTTGAAACTTTGACACTTGATCACTGCAAAGGCCTAAACAATCTTCCAGACAAGGTTGCTGACCTTGGATCGCTACGTGTTCTTCGTATATATGGTTGCATACAACTTGACGCATCAAATCTTCATGTCTTATTTAATGGTTTAAGGTCTTTGGAAACACTACTGCTAGAAGAATGTCTTAACTTACATGAAATTCCAGACAACATAAGTCTCCTATGTTCATTGCATCATTTGTTACTGAAAGGAACAAATGTTGAGAGATTCCCTACAAGCATTAAGCATCTTACAAAGCTAGAAAAGCTTGACTTAAGTGGTTGCAAGAGGCTTAATTTTCTACCAGAACTTCCACTATCCATAAAAGAGTTATATGCCACTAACTGCTCATCTTTGGAGACTGTAATGTTCCCTTTGAGGACTACTGATCTAGTACATGCATATAAGTCATACACTACATTCCAAAATTGCATGAACTTGGATAAACATTCACTCAATGCTATTGGAGTAGATGCACTTGTCAACATAAAGAAATTGGCATATGAACATCTCTCAAATATTGGAAGCAAGTTCCTTGATGGTCCAGCTTATGTTATCTACCCAGGAAATGAAGTTCCAGATTGGTTCAGGGACAAGACAACACAAGCTGCAGTAACTATTGATCTCTCTTCTGCTCCTTCATGTTCCAAGGTTATGGGTTTCATCTTCTGTGTCATTGTTGGTCAGTTTCCATCAAATGACAAGAACTTCATTGGATGTGACTGCTACCTAGAAACAGGTAATGGTGAAAGGGTTAGCCTTGGACACAAGATGAATAATGCATGGTCTAGTATACATGCTTGTGAATTTCTTTCTGATCATGTGTGCATGTGGTTCGACGAACAATGTTGTCTGCAAAACCGCGAGTGCCAAGACGAAAGCATGGAAGAACTTGTTCCAAAGGTTACATTTGATTTTTTTGCTCAATCCGGTAGTACATGGGAAAAAGAGAATGATATTATGATAAAAGGGTGTGGAGTGTGTCCAATATATGACTCAGAATATAATGATTTCATTAAACAAATGGAGCTGGAGTTGACACTGCAATGCAGCTCATATCAGAATGAAACACAATCTCTGAAACAGAAATGCAAGGCATTCATCTTTCCACCTCTACAAATTGAAAACTGGAAGAGTGCAACACAAGGCTTGAAGGAAATATTGTTTCTATGA 3153 0.3695 MASSSSSSYGVTQIKYDVFISFRGTDIRYGFLSHLKKELKQKQVDAFVDDRLESGDEISPALVKAIEQSLISLIIFSKDYASSKWCLEELVKIVECMARNKQIVLPVFYNVDPSDVRYQKGTYGDAFAIHEKNKRKLSKLQNWRSALNIAANLSGFHSSKFGDEVELIEEVVKCLLARLNLMYQSELTDLVGIEERIADIESLLFLTSTIDVRVIGIWGMGGIGKTTIAAAVFNRLCFEYEGCCFMANIREESEKHGTISLKNKILSILLKENDLYISTPNGVPPYVKRRLLRIKVLVVLDDINDSEQLENLVGELDWFGPGSRIIVTTRDKQVLGKRVDSIYEAKALNFDEAVKLFILNAFKQISCLDMEWIELSRKVIQYANGNPLALKVLGSFLYGKTKIEWESQLQKLKKMPHAKIQNVLRLTFDKLDREEKNIFLYVACFLKGYESHRIIVLLDACGFSTIIGLRVLQDKALIVEAKGSGRSIVSMHDLIQEMGWEIVREESIDDPGKRSRLWDPSDIHQVLKNNTNLQHLKKIDLSNSKHLLELPDFSKATNLEEIELSGCRNLLNVHPSILSLHKLVRLNLFFCKALTSIRSDTHLRSLRDLFLGGCSRLKEFSLTSENMKDLNLNSTAINELPSSIGRLKKLETLTLDHCKGLNNLPDKVADLGSLRVLRIYGCIQLDASNLHVLFNGLRSLETLLLEECLNLHEIPDNISLLCSLHHLLLKGTNVERFPTSIKHLTKLEKLDLSGCKRLNFLPELPLSIKELYATNCSSLETVMFPLRTTDLVHAYKSYTTFQNCMNLDKHSLNAIGVDALVNIKKLAYEHLSNIGSKFLDGPAYVIYPGNEVPDWFRDKTTQAAVTIDLSSAPSCSKVMGFIFCVIVGQFPSNDKNFIGCDCYLETGNGERVSLGHKMNNAWSSIHACEFLSDHVCMWFDEQCCLQNRECQDESMEELVPKVTFDFFAQSGSTWEKENDIMIKGCGVCPIYDSEYNDFIKQMELELTLQCSSYQNETQSLKQKCKAFIFPPLQIENWKSATQGLKEILFL 1050
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal10g1096 1050 Pfam TIR domain 15 192 IPR000157 GO:0007165
Lal10g1096 1050 Gene3D - 347 432 IPR042197 -
Lal10g1096 1050 Gene3D - 13 181 IPR035897 -
Lal10g1096 1050 ProSiteProfiles TIR domain profile. 14 179 IPR000157 GO:0007165
Lal10g1096 1050 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 179 441 IPR027417 -
Lal10g1096 1050 Gene3D - 182 342 IPR027417 -
Lal10g1096 1050 Gene3D Ribonuclease Inhibitor 517 625 IPR032675 -
Lal10g1096 1050 Gene3D Ribonuclease Inhibitor 626 813 IPR032675 -
Lal10g1096 1050 SUPERFAMILY Toll/Interleukin receptor TIR domain 5 156 IPR035897 -
Lal10g1096 1050 Pfam C-JID domain 847 994 IPR045344 -
Lal10g1096 1050 PANTHER DISEASE RESISTANCE PROTEIN (TIR-NBS-LRR CLASS) 646 1012 - -
Lal10g1096 1050 PANTHER DISEASE RESISTANCE PROTEIN (TIR-NBS-LRR CLASS) 11 533 - -
Lal10g1096 1050 PANTHER DISEASE RESISTANCE PROTEIN (TIR-NBS-LRR CLASS) 539 645 - -
Lal10g1096 1050 PRINTS Disease resistance protein signature 214 229 - -
Lal10g1096 1050 PRINTS Disease resistance protein signature 290 304 - -
Lal10g1096 1050 PRINTS Disease resistance protein signature 383 397 - -
Lal10g1096 1050 PRINTS Disease resistance protein signature 742 758 - -
Lal10g1096 1050 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 539 645 IPR044974 GO:0006952
Lal10g1096 1050 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 11 533 IPR044974 GO:0006952
Lal10g1096 1050 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 646 1012 IPR044974 GO:0006952
Lal10g1096 1050 SUPERFAMILY L domain-like 491 784 - -
Lal10g1096 1050 SMART till_3 15 153 IPR000157 GO:0007165
Lal10g1096 1050 Pfam NB-ARC domain 200 418 IPR002182 GO:0043531
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal10g1096 Lal-Chr10 17821900 17826838 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal10g1096 16 785 WRKY Transcription Factor Family AT4G12020 30.139 4.73e-80 285
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal10g1096 - - ccaj:109805840 930.243