Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal10g1085 ATGGCGTATCAGACCCAAGATCACGAATCAGGATCCGAATCCAACAACAATCAGAAACGCCTCTACAATCCTTACAAGGATCTCGAGGTTCCGATTCGAAATCTCTACCAACTCCCAACCTCTCCAGAGCACCTTTTTGTCGAAGAGGCTCGCCGAAAGCATCGATCTTGGGGTGAGAATCTTACCTTTTACACAGGCTGTGGTTACCTTGCCGGTGCCGTAGGTGGCGCCGGTGTCGGACTTGTTGAAGCCGTTAAGGCCTTCGAATCTGGAGATACCAATAAGCTCCGAATTAATCGCGTCTTGAATACTTCGGGTCACTCAGGAAGGGTTTGGGGAAACAGGCTTGGGGTTATTGGTTTGCTTTACGCTGGAATTGAGAGCGGGATCGCGGAAGCGAGGGACACCGATGATGTGTGGAATAGCGTGGCGGGTGGGCTGGGGACCGGTGCGTTGTATCGTGCAGCGAGAGGGCTGAGATCAGCCGCCGTTGCAGGTGCGGTTGGTGGTGTGGTGGTTGGTGTTGTTGTCACGGCGAAGCAGGCATTGAAACGTTATGTTCCTATATGA 570 0.5281 MAYQTQDHESGSESNNNQKRLYNPYKDLEVPIRNLYQLPTSPEHLFVEEARRKHRSWGENLTFYTGCGYLAGAVGGAGVGLVEAVKAFESGDTNKLRINRVLNTSGHSGRVWGNRLGVIGLLYAGIESGIAEARDTDDVWNSVAGGLGTGALYRAARGLRSAAVAGAVGGVVVGVVVTAKQALKRYVPI 189
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal10g1085 189 Pfam Tim17/Tim22/Tim23/Pmp24 family 63 172 - -
Lal10g1085 189 PANTHER MITOCHONDRIAL IMPORT INNER MEMBRANE TRANSLOCASE SUBUNIT TIM23-2-LIKE 8 189 - -
Lal10g1085 189 PANTHER TIM23 8 189 IPR045238 GO:0022857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal10g1085 Lal-Chr10 17767503 17768072 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal10g1085 7 189 Chloroplast and Mitochondria Gene Families AT1G72750 66.667 8.08e-76 224
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal10g1085 K17794 - gmx:100777112 257.299
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal25g0344 25 2355292 2355861 Lal10g1085 10 17767503 17768072 LSH