Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal10g1084 ATGGATTCAATTAAAGAAGGGTCCACTGTGATTGCCATTGATAAAGACAAGAACAGTCAATATGCTGTAAAATGGGCTGTTGATAATCTTTTGAAGAAGAATACAACTTGCACTCTCATTCACGTTAGAACCAAGGCCTTGCATCCCCGTGATGTTGAAACTGCCTCTAAACAAGGTCGTCCACCAACCAACGAAGAATTACACCAATTCTTTCTTCCCTTCAGAGGATTTTGTGCTCGAAAAGGGATTGTAGCAAAGGAGTTGGTGCTACATGACATTGATGTTCCAAGTGCACTCACTGATTACATCATTGATAATAATATCAAGAGTATTGTTGTTGGTGCTCCCAACTGGAATGTTTTTAGAAGGATATTTAACGATGCAGATGTGTCATCTAGCTTAGTCAAGTCTGCACCAGAATCTTGCACCGTACATGTTGTATCAAAACGAAAAGTGGAGAACCTTCAACCGTTAGGCCCTTCTCAACATAAAATTATCAAACCAACAACAAAGTTATTAAAAGAAACTCTTAGTCTCAAGGGGAATTCTACCTCAGAAGATTTATTTAGAAAAACTTACAAAAATGGGATTTTGAGACAATCAAGCGATGTAATATGTTTTGGTCAAAGCAACGTTGGTATACAGCAAGTGAAACCATACATATCCAGTGAAGAGAGTAAGTCACCAACACTATCAGATGAAAGCAATTCATCAAAACTAATTGATGGTTCTAAGTTGAATGAGAACCAAGATGCAGTTAGGAACTCAAATAGTTCTTCTACCACCAACTCTTCTACAAAGTCCCCTAAAACCTTGGAGACAGAAATAAATAAGTTGAAACTGGAACTGAAGAAAACAACAGAAGAGTATACTAAAGCATGCAGAGAAGCTGTTATGGCAAAAGGGAAGGCAATGGATCTTGAAAAGTTTATGTTTGAAGAAGAACAGAACATAGAAAAAGCTCGGCTTGGTGAAGAGGCTGCATTGGCTTTGGCAGAAGTAGAGAAGCAGAAAACCAAGGCAGCAATGGAATCAGCTGAAATGTCGCGATGCCTCGCAGCAATAGAGATCAAGAAGAGAAAGCAGACCGAAAAAAGAGCAATGCAAAAGGAAGAAGAGAAGCAAAGAGCATCAAATACTAATCCACCTCATAATATTCTTTGCAAAAGATACAGTATTGAAGAAATTGAAGTTGCAACAAATTGCTTTGACAAAGCTCTGAAACTTGGTGAAGGAGGATATGGACCTGTTTTTAAAGGGGTGCTTGATAACACTGTTGTTGCCATTAAGGCCTTGAGATCAAACATAAACCAAGGGGATAGGCAATTTCAACAAGAGGTTGAAGTTTTGACAACAGTAAGACATCCAAACATGGTTCTACTTCTAGGTGTCTGCCCAGAGAACGGATGCCTTGTATATGAGTTCACCGAAAATGGTACCTTAGAAGATCGTCTCTTCCGGAAAGATAACACTCCACCACTACCATGGAACCTAAGATTCAAAATAGCATCAGAAATTGCCACTGGCCTTCTTTTCCTTCACCAGACAAAGCCTGAGCCAATTGTACATCGCGATCTCAAGCCATCAAACATTCTATTAACCAAGAACTTTGTAACCAAGATCGCGGACGTGGGTTTGGCCAGACTAGTTCCCCCTAGTGCTGCTGACAAAACCACTCAGTATCACATGACTGCTACAGCAGGCACATTTTTCTACATTGACCCTGAATATCAACAAACAGGGTTGTTGGGTGTGAAATCAGATATATATTCATTAGGTGTAGTATTGCTACAAATTATTACTGGAAAGAGTCCTATGGGCGTGGCTCGATTGGTTGAGGAAGCGATACATGAAGGTAAGTTTGAAGAGGTGCTTGATCCAAATGTGACAGATTGGCCTGTTGAAGAGACTTTGTCATTAGCTAGGTTGGCTTTAAAGTGTTGTGAAATGAGAAAAAGGGATAGGCCTGATCTTGGTTCTGTCATTTTGCCTGAGCTGAATCGACTAAGAGATCTAGGAAGAGTCATTGACACTGATATTGTACCAGCTAGAAGGTTAGTTAACATTTCAACTCACTAA 2079 0.3978 MDSIKEGSTVIAIDKDKNSQYAVKWAVDNLLKKNTTCTLIHVRTKALHPRDVETASKQGRPPTNEELHQFFLPFRGFCARKGIVAKELVLHDIDVPSALTDYIIDNNIKSIVVGAPNWNVFRRIFNDADVSSSLVKSAPESCTVHVVSKRKVENLQPLGPSQHKIIKPTTKLLKETLSLKGNSTSEDLFRKTYKNGILRQSSDVICFGQSNVGIQQVKPYISSEESKSPTLSDESNSSKLIDGSKLNENQDAVRNSNSSSTTNSSTKSPKTLETEINKLKLELKKTTEEYTKACREAVMAKGKAMDLEKFMFEEEQNIEKARLGEEAALALAEVEKQKTKAAMESAEMSRCLAAIEIKKRKQTEKRAMQKEEEKQRASNTNPPHNILCKRYSIEEIEVATNCFDKALKLGEGGYGPVFKGVLDNTVVAIKALRSNINQGDRQFQQEVEVLTTVRHPNMVLLLGVCPENGCLVYEFTENGTLEDRLFRKDNTPPLPWNLRFKIASEIATGLLFLHQTKPEPIVHRDLKPSNILLTKNFVTKIADVGLARLVPPSAADKTTQYHMTATAGTFFYIDPEYQQTGLLGVKSDIYSLGVVLLQIITGKSPMGVARLVEEAIHEGKFEEVLDPNVTDWPVEETLSLARLALKCCEMRKRDRPDLGSVILPELNRLRDLGRVIDTDIVPARRLVNISTH 692
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal10g1084 692 ProSiteProfiles Protein kinase domain profile. 403 666 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal10g1084 692 MobiDBLite consensus disorder prediction 362 381 - -
Lal10g1084 692 CDD STK_N 8 149 - -
Lal10g1084 692 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 10 147 - -
Lal10g1084 692 Coils Coil 329 349 - -
Lal10g1084 692 PANTHER PROTEIN KINASE SUPERFAMILY PROTEIN 8 675 - -
Lal10g1084 692 PANTHER OS02G0152300 PROTEIN 8 675 - -
Lal10g1084 692 Gene3D HUPs 8 147 IPR014729 -
Lal10g1084 692 Coils Coil 354 380 - -
Lal10g1084 692 ProSitePatterns Serine/Threonine protein kinases active-site signature. 521 533 IPR008271 GO:0004672|GO:0006468
Lal10g1084 692 Gene3D Transferase(Phosphotransferase) domain 1 476 676 - -
Lal10g1084 692 SMART serkin_6 403 666 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal10g1084 692 Pfam Protein kinase domain 406 657 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal10g1084 692 Coils Coil 276 296 - -
Lal10g1084 692 Gene3D Phosphorylase Kinase; domain 1 382 475 - -
Lal10g1084 692 CDD STKc_IRAK 409 669 - -
Lal10g1084 692 MobiDBLite consensus disorder prediction 220 272 - -
Lal10g1084 692 MobiDBLite consensus disorder prediction 362 378 - -
Lal10g1084 692 Pfam Universal stress protein family 10 144 IPR006016 -
Lal10g1084 692 SUPERFAMILY Protein kinase-like (PK-like) 380 661 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal10g1084 Lal-Chr10 17762208 17766584 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal10g1084 9 673 Receptor kinase-like Gene Family AT1G17540 47.299 0.0 605
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-IXb Lal10g1084 Pkinase 1.9e-40 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal10g1084 - - gmx:100814365 786.178
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal20g1054 20 14436097 14443918 Lal10g1084 10 17762208 17766584 PCT