Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal10g1081 ATGGACTTGGATGCTGCCGAGGAAGAATCGGCACCAGAGGTTCATGTACCTGCTGAAATTGATTGGAAAATGCTTGATAAATCCAAGTTTTTCTTCCTTGGTGCAGCACTTTTCTCTGGTGTTTCAGCAACATTGTACCCTGCTGTTGTGTTAAAAACCCGACAGCAAGTAGCTCAGTGCCATGTTTCTTGCATCAAGACTGCATTTTCAGTGATTAGAGGTGAGGGTTTTCGAGCATTGTATAGAGGATTTGGGACCTCTTTGATGGGTACAATCCCTGCTAGAGCTTTATATATGGCCACCCTAGAGGTCACAAAGAGTAATGTAGGTACTACTGCTACTGTTAGGTTAGGCCTGGCCGAACCAACTGCTGCCACAATTGCAAATGCAGCTGCAGGGTTGAGTGCAGCCATGGCGGCTCAACTTGTTTGGACCCCAGTCGATGTTGTTAGCCAGAGGTTGATGGTTCAAGGTGGACCTGATTCGCCACGTCAATATACGAATGGGATTGACGCCTTCAGGAAGATTCTTAGGAATGATGGTCCAAGGGGATTGTATAGAGGGTTTGGGATATCAATTCTGACCTATGCGCCTTCAAATGCGGTTTGGTGGGCTTCATATTCTGTTACACAAAGGCTTGTTTGGGGTGGAATTGGATACTACTTATGCAAGAAATGCGTGGATGATAGGAGTGAGACTACTAGTGCAGGTCACGAAATGAGACCAGATTGGAAAACAGTGATGGCAGTTCAGGGAGTCAGTGCAGCAATGGCAGGTGGCATGTCTGCTTTAGTCACCATGCCGTTAGATACTATCAAGACCAGACTGCAGGTCTTGGAGGGCGATGAGAATGGTCGTCGAGGACCAACAGTAATGCAGACAGTGAGAAATTTGGTTAAGGAAGGTGGTTGGATGGCATGTTATAGAGGGCTAGGGCCAAGATGGGCTTCAATGTCAGTGTCTGCAACAACGATGATCACTACATATGAGTTCCTAAAACGACTTTCCACGAAGAATCAAGAGGTTTTGACATGA 1035 0.4638 MDLDAAEEESAPEVHVPAEIDWKMLDKSKFFFLGAALFSGVSATLYPAVVLKTRQQVAQCHVSCIKTAFSVIRGEGFRALYRGFGTSLMGTIPARALYMATLEVTKSNVGTTATVRLGLAEPTAATIANAAAGLSAAMAAQLVWTPVDVVSQRLMVQGGPDSPRQYTNGIDAFRKILRNDGPRGLYRGFGISILTYAPSNAVWWASYSVTQRLVWGGIGYYLCKKCVDDRSETTSAGHEMRPDWKTVMAVQGVSAAMAGGMSALVTMPLDTIKTRLQVLEGDENGRRGPTVMQTVRNLVKEGGWMACYRGLGPRWASMSVSATTMITTYEFLKRLSTKNQEVLT 344
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal10g1081 344 Pfam Mitochondrial carrier protein 37 108 IPR018108 -
Lal10g1081 344 Pfam Mitochondrial carrier protein 126 214 IPR018108 -
Lal10g1081 344 Pfam Mitochondrial carrier protein 250 339 IPR018108 -
Lal10g1081 344 SUPERFAMILY Mitochondrial carrier 23 332 IPR023395 -
Lal10g1081 344 Gene3D Mitochondrial carrier domain 29 342 IPR023395 -
Lal10g1081 344 PRINTS Mitochondrial carrier protein signature 31 44 IPR002067 GO:0055085
Lal10g1081 344 PRINTS Mitochondrial carrier protein signature 83 103 IPR002067 GO:0055085
Lal10g1081 344 PRINTS Mitochondrial carrier protein signature 186 204 IPR002067 GO:0055085
Lal10g1081 344 PRINTS Mitochondrial carrier protein signature 255 277 IPR002067 GO:0055085
Lal10g1081 344 ProSiteProfiles Solute carrier (Solcar) repeat profile. 246 335 IPR018108 -
Lal10g1081 344 ProSiteProfiles Solute carrier (Solcar) repeat profile. 124 213 IPR018108 -
Lal10g1081 344 PANTHER MITOCHONDRIAL SUBSTRATE CARRIER-LIKE PROTEIN 1 341 - -
Lal10g1081 344 PANTHER MITOCHONDRIAL SUBSTRATE CARRIER FAMILY PROTEIN J 1 341 - -
Lal10g1081 344 ProSiteProfiles Solute carrier (Solcar) repeat profile. 26 108 IPR018108 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal10g1081 Lal-Chr10 17752733 17753767 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal10g1081 1 341 Chloroplast and Mitochondria Gene Families AT1G72820 73.851 0.0 502
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal10g1081 K15121 - gmx:100784616 519.62
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal10g1081 10 17752733 17753767 Lal10g1081 10 17752733 17753767 ECH