Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal10g1072 ATGTATAAGGATAAATCTCTGGGCCACGGTGGAGGTTCCCCGCCTCTATCGGAATGTTATTCGGGTTACTCACCAACTGGAAGTGCTTCCTTTAATGTGAAATCTGAGCCAGCATCTTTATCATCATCGTTTCCTCCACCGGTTGTTCCGGGTACTGGTGCAGATTCTACTCATTTTGGACATGGAATGTCCACGGAATCGAGTGGGTTTAGTCATGATATTAGCAGAATGTCTGATAAGCCTATGAAAAGTGGAGGTCATAGACGAGCTCATTCGGAGATTCTCACATTACCTGATGATATTAGCTTCGACAGCGACCTTGGTGTAGTTGGAGGTGCTGATGGGCCCTCATTCTCTGATGACACTGAGGAAGATTTACTGTCTATGTATCTTGATATGGATAAGGTCAATTCCACTTCTGCTACATCGACATTTCAATTCAGTGAGCCATCTAATGATGCAGCCGCATCAGGTTCAGGGCCAACATCAGCACCTGCATCAGGAGCACACACCTCTTCTGCAGAGAACATATTTACTGGTACCAATGAAAGGCCCAGAATTAGACACCAGCATAGCCAATCCATGGATGGGTCAACAACCATTAAACCTGAGATGCTTGTATCAGGTTCTTCAGATGACATATCTGCAGCCGATTCCAAAAAAGCAATGTCAGCTGCCAAGCTTGCAGAACTTGCCTTAATCGACCCCAAGCGTGCCAAAAGGATATGGGCAAATAGGCAATCTGCGGCAAGGTCAAAAGAGAGGAAGATGCGCTACATTGGTGAGCTTGAAAGAAAGGTTCAGACATTACAAACGGAAGCAACTTCTTTGTCCGCACAATTAACTCTCTTACAGAGAGATACAAATGGGCTGAATTCTGAGAACAGTGAACTGAAGCTGCGGTTGCAAACCATGGAGCAACAAGTTCGCTTGCAAGATGCATTAAATGATGCATTAAAAGAGGAAATTCAACATTTGAAAATACTGACTGGGCAAGCTATGCCTAATGGAGGACTCATGACAAAGTTTGCTTCTTTTGGAGGGAGCCAGCAATTCTATCCCAATAATAATCATTCCATGCATACTCTTTTAGCTGCACAACAGTTTCAACAGCTCCACATTCATCCTCAGAAGCAGCAGCATCAATTTCAGCAACGGCAGCAGCATCAATTTCAGCACCATCAGCAGCAGCAACAGGAACGGGAACAGCAGCATCAACAATCAGGGGACTTGAAAATGAGAGCAGCTACGCCACCTCCATGTCCAAGAGATGATACTTCTCCTGATGCAAATCCTTCAGCTTCCAATGATTGTTGA 1317 0.448 MYKDKSLGHGGGSPPLSECYSGYSPTGSASFNVKSEPASLSSSFPPPVVPGTGADSTHFGHGMSTESSGFSHDISRMSDKPMKSGGHRRAHSEILTLPDDISFDSDLGVVGGADGPSFSDDTEEDLLSMYLDMDKVNSTSATSTFQFSEPSNDAAASGSGPTSAPASGAHTSSAENIFTGTNERPRIRHQHSQSMDGSTTIKPEMLVSGSSDDISAADSKKAMSAAKLAELALIDPKRAKRIWANRQSAARSKERKMRYIGELERKVQTLQTEATSLSAQLTLLQRDTNGLNSENSELKLRLQTMEQQVRLQDALNDALKEEIQHLKILTGQAMPNGGLMTKFASFGGSQQFYPNNNHSMHTLLAAQQFQQLHIHPQKQQHQFQQRQQHQFQHHQQQQQEREQQHQQSGDLKMRAATPPPCPRDDTSPDANPSASNDC 438
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal10g1072 438 Gene3D - 236 289 - -
Lal10g1072 438 MobiDBLite consensus disorder prediction 142 201 - -
Lal10g1072 438 MobiDBLite consensus disorder prediction 1 89 - -
Lal10g1072 438 SUPERFAMILY Leucine zipper domain 237 288 IPR046347 GO:0003700|GO:0006355
Lal10g1072 438 Coils Coil 253 322 - -
Lal10g1072 438 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 235 298 IPR004827 GO:0003700|GO:0006355
Lal10g1072 438 MobiDBLite consensus disorder prediction 373 394 - -
Lal10g1072 438 Pfam bZIP transcription factor 237 295 IPR004827 GO:0003700|GO:0006355
Lal10g1072 438 MobiDBLite consensus disorder prediction 373 438 - -
Lal10g1072 438 MobiDBLite consensus disorder prediction 58 74 - -
Lal10g1072 438 MobiDBLite consensus disorder prediction 142 180 - -
Lal10g1072 438 PANTHER TRANSCRIPTION FACTOR POSF21-RELATED 7 429 - -
Lal10g1072 438 SMART brlzneu 233 297 IPR004827 GO:0003700|GO:0006355
Lal10g1072 438 MobiDBLite consensus disorder prediction 19 46 - -
Lal10g1072 438 PANTHER TRANSCRIPTION FACTOR POSF21-RELATED 7 429 - -
Lal10g1072 438 CDD bZIP_plant_RF2 238 287 IPR044759 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal10g1072 Lal-Chr10 17696421 17700076 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal10g1072 20 366 bZIP Transcription Factor Family AT1G06070 68.946 1.66e-154 442
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Lal10g1072 bZIP_1 4.6e-09 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal10g1072 - - gmx:100786738 570.081
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal25g0364 25 2468748 2474710 Lal10g1072 10 17696421 17700076 LSH
Lal10g1072 10 17696421 17700076 Lal8g0306 8 2052761 2055830 LSH
Lal10g1072 10 17696421 17700076 Lal1g0276 1 1621817 1625191 PCT
Lal10g1072 10 17696421 17700076 Lal9g0182 9 1135633 1140100 PCT
Lal1g0276 1 1621817 1625191 Lal10g1072 10 17696421 17700076 PCT
Lal9g0182 9 1135633 1140100 Lal10g1072 10 17696421 17700076 PCT