Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal10g1069 ATGTCTCAGAATTTGGAAGGAGGGGCATTAAAAAATGAAACTTTTTTGGCTGAAAGCCTGAAGTTGGGCTCATTAATCTCAACAGAATCTGTGATTACTAGGCCTTGCTTAGAGGAGTTTGGGGTTGATGGCTCCATTAATGATGAGATTCTAGCCAATGCTACTATGGGAGAGGTTAGTAGTAGCATAGCTGATGAAAACAATAAGGGTGGCAGTTCGTTTGATTTAGTTTGTAAAGAAGATGATGATAACGATATAACCCGAGATTCTTCTGGATTGGACACAATTCCATCAGCAATTCCTGCGGTATCAGTTGTGTCAGCTGATGAGCCATATGTGGGTCAGGAGTTTGAATCAGAATCAGCAGCACATGCATTTTATAATGCATATGCCACAAGTGTTGGATTCATCATACGTGTAAGTAAACTTTCACGATCAAGGCGTGATGGAACTGCTATTGGACGGTCTCTTGTTTGCAACAAAGAGGGTTACAGAATGCCTGACAAGCGTGAAAAGATTGTAAGGCAAAGGGTAGAGACAAGGGTTGGTTGCAGGGCGATGATTATGGTGAGGAAAGTAAGCTCCGGTAAATGGGTTGTTACAAAATTTGTAAAGGAGCATACTCATCCTCTGGCTGTTACACCTGGAAAGGGTAGAAGGGACTTCATTTATGAGCAATATCCGAACGAGCATGATAAAATTCGAGAACTATCTCAGCAGTTGGCTTTAGAGAAAAGGAGAACCGCAACCTATAAAAGGCATCTTGAGTTGTTATTTGAGCACATTGAGGAGCATAATAATAGTCTTTCAAGGAGAATACAGCACATAGTTGACAATGTGAAGGAGATGGAAACCAAGGAACAAGAGAGTCATAGATAG 879 0.4118 MSQNLEGGALKNETFLAESLKLGSLISTESVITRPCLEEFGVDGSINDEILANATMGEVSSSIADENNKGGSSFDLVCKEDDDNDITRDSSGLDTIPSAIPAVSVVSADEPYVGQEFESESAAHAFYNAYATSVGFIIRVSKLSRSRRDGTAIGRSLVCNKEGYRMPDKREKIVRQRVETRVGCRAMIMVRKVSSGKWVVTKFVKEHTHPLAVTPGKGRRDFIYEQYPNEHDKIRELSQQLALEKRRTATYKRHLELLFEHIEEHNNSLSRRIQHIVDNVKEMETKEQESHR 292
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal10g1069 292 Coils Coil 266 286 - -
Lal10g1069 292 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN 39 290 - -
Lal10g1069 292 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 39 290 - -
Lal10g1069 292 Pfam FAR1 DNA-binding domain 126 212 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal10g1069 Lal-Chr10 17678316 17691353 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Lal10g1069 FAR1 1.1e-29 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal10g1069 - - gmx:100806900 387.882
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal25g0368 25 2488592 2491552 Lal10g1069 10 17678316 17691353 LSH
Lal10g1069 10 17678316 17691353 Lal8g0309 8 2070325 2075022 LSH
Lal10g1069 10 17678316 17691353 Lal2g0177 2 1052372 1054689 PCT
Lal2g0177 2 1052372 1054689 Lal10g1069 10 17678316 17691353 PCT