Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal10g1041 ATGGGAGAAGAGGTTAAGAACTATAGCCACGACACCGAACGGGTCACGGAGTGGGAGATAGGTCTTCCCACCGCCGATGATCTTACACCACTCTCTCAGCCGTTGATCCCGCCGGAACTCGCATCTGCTTTCAGTATCTCACCGGAGCCTTACCGGACACTCCTCGACGTCAATCGCGCCTCCAACGACACCATCTCCGCCCTCCGAAGCGGTGGTGGTGGTGGAGGATCTCAGACCTTATCTGCGGTCATCGAACCAGATGAAGAAGAAGAAGAGGAAGAACCTGATCGGGAAAACGGTTCCGGTACTGAATGTAAAAAGCTTCGTAGACTCGATTCTGCGGAGGATGCGGATTCGAATATGCAGAATAACAACGATGATCCATCGAGTAGGTCAGTGAAACGACCGCGTTTAGTGTGGACACCGCAATTACACAAACGATTCGTTGACGTTGTAGCGCACTTAGGGATAAAAAACGCGGTTCCGAAAACGATTATGCAGTTGATGAACGTTGAGGGTTTGACACGTGAAAACGTAGCGAGTCACCTTCAGAAATATCGTCTTTACCTTAAGAGAATGCAAGGTCTTTCAAACGAAGGTCCTTCTTCTTCAGATCAGCTTTTCGCTTCCACGCCGGTGCCTCAGAGCTTGCACGATTCCGGCGGTGGCGGTGGTGGTGGCGGTGGCACTTCTGGTGGTCATTCTCATCATGCTCCAATTCCGATGCCTTATCCTCCGCCACATATGATGGCGATGCTTGGGATGCCTCATAATGGATTCAATAACGGTGGATTTCAGCAAAGGGATTGGTCTTCGGGTTTTTCATACCCTCACCACGCTCATGGTCATGGCATTACTCCCAGTGGTGATAAATGA 876 0.5068 MGEEVKNYSHDTERVTEWEIGLPTADDLTPLSQPLIPPELASAFSISPEPYRTLLDVNRASNDTISALRSGGGGGGSQTLSAVIEPDEEEEEEEPDRENGSGTECKKLRRLDSAEDADSNMQNNNDDPSSRSVKRPRLVWTPQLHKRFVDVVAHLGIKNAVPKTIMQLMNVEGLTRENVASHLQKYRLYLKRMQGLSNEGPSSSDQLFASTPVPQSLHDSGGGGGGGGGTSGGHSHHAPIPMPYPPPHMMAMLGMPHNGFNNGGFQQRDWSSGFSYPHHAHGHGITPSGDK 291
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal10g1041 291 PANTHER HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN-RELATED 9 282 IPR044841 GO:0003700|GO:0006355
Lal10g1041 291 MobiDBLite consensus disorder prediction 66 138 - -
Lal10g1041 291 Pfam Myb-like DNA-binding domain 139 187 IPR001005 -
Lal10g1041 291 MobiDBLite consensus disorder prediction 196 245 - -
Lal10g1041 291 MobiDBLite consensus disorder prediction 84 98 - -
Lal10g1041 291 Gene3D - 132 194 - -
Lal10g1041 291 PANTHER HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN-RELATED 9 282 - -
Lal10g1041 291 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 132 191 IPR017930 -
Lal10g1041 291 MobiDBLite consensus disorder prediction 99 116 - -
Lal10g1041 291 MobiDBLite consensus disorder prediction 196 217 - -
Lal10g1041 291 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 136 188 IPR006447 GO:0003677
Lal10g1041 291 MobiDBLite consensus disorder prediction 271 291 - -
Lal10g1041 291 SUPERFAMILY Homeodomain-like 133 192 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal10g1041 Lal-Chr10 17493788 17494663 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal10g1041 1 284 G2-like Transcription Factor Family AT3G46640 52.303 4.11e-82 249
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Lal10g1041 Myb_DNA-binding 1.1e-08 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal10g1041 - - aprc:113858844 322.783