Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal10g1038 ATGGCAACGAAGATGAAGACCAAGGTTCCATTGAAGCATCTCAAGCTTAATGTTCCTGCTCAAGATACCCCCATCACTTCCTTTCTGACTGCAAGTGGCACATTCCATGATGGAGATCTGCTTTTGAACCAGAAAGGATTGCGTCTCATCTCTGTAGAAAATGAGTCGCAGCCTTCTGATGGTAAAGAACTCGAATTTGATTTTTCTTTGGATGACCTTGAGACTGTCAAAGTAATTGGGAAAGGCAGTGGCGGGGTTGTACAACTTGTTCGCCATAAGTGGACTGGAAAATTGTTTGCTTTAAAGGTCATTCAGATGAATATACAAGAGGATATTCGAAAGCAGATTGTTCAGGAACTGAAAATAAACCAAGCATCACAGTGTCCACATGTTGTAGTTTGCTACCACTCTTTCTATCATAATGGAGTCATATCTCTTGTTTTAGAATACATGGATCGTGGTTCTCTAGCAGATGTAATCAGACAAGTCAAAACGATACTAGAACCATATCTTGCTGTGGTTTGTAAGCAGATATTGCAAGGTCTTGTTTACTTGCATAATGAAAGGCATGTAATACATAGGGACATCAAACCATCCAACCTATTAGTCAATGAAAAAGGAGAGGTGAAGATTACTGATTTTGGTGTTAGTGCTATGCTGGCAACCTCAATGGGCCAAAGGGATACATTCGTTGGAACTTACAATTACATGTCGCCAGAAAGAATCAGTGGGAGCACTTATGATTACAGCAGTGACATCTGGAGTTTGGGCATGGTAGTGCTTGAGTGTGCCATAGGAAGGTTTCCTTATATACAATCCGAAGACCAGCAAGGCCAGCCTAGTTTTTATGAGCTTTTGGCAAATATTGTACAAAGCCCTCCACCTTCGGCTCCATCTGATCAATTCTCTCCAGAATTCTGTTCTTTTGTGTCATCCTGCATTCAAAAGGATCCTAGAGACAGATTGACATCATTGGAACTTCTGAGTCATCCTTTTATAAAAAAGTTTGAAGAAAAAGATCTTGATCTGGAGATTTTGGTGGGTAGTTTGGAACCCCCTGTAAACTTTACTCGATAA 1077 0.4058 MATKMKTKVPLKHLKLNVPAQDTPITSFLTASGTFHDGDLLLNQKGLRLISVENESQPSDGKELEFDFSLDDLETVKVIGKGSGGVVQLVRHKWTGKLFALKVIQMNIQEDIRKQIVQELKINQASQCPHVVVCYHSFYHNGVISLVLEYMDRGSLADVIRQVKTILEPYLAVVCKQILQGLVYLHNERHVIHRDIKPSNLLVNEKGEVKITDFGVSAMLATSMGQRDTFVGTYNYMSPERISGSTYDYSSDIWSLGMVVLECAIGRFPYIQSEDQQGQPSFYELLANIVQSPPPSAPSDQFSPEFCSFVSSCIQKDPRDRLTSLELLSHPFIKKFEEKDLDLEILVGSLEPPVNFTR 358
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal10g1038 358 CDD PKc_MAPKK_plant_like 71 338 - -
Lal10g1038 358 ProSitePatterns Serine/Threonine protein kinases active-site signature. 191 203 IPR008271 GO:0004672|GO:0006468
Lal10g1038 358 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE KINASE 6 5 357 - -
Lal10g1038 358 SUPERFAMILY Protein kinase-like (PK-like) 70 347 IPR011009 -
Lal10g1038 358 ProSiteProfiles Protein kinase domain profile. 73 333 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal10g1038 358 Gene3D Phosphorylase Kinase; domain 1 45 152 - -
Lal10g1038 358 Gene3D Transferase(Phosphotransferase) domain 1 154 350 - -
Lal10g1038 358 SMART serkin_6 73 333 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal10g1038 358 PANTHER MITOGEN-ACTIVATED KINASE KINASE KINASE 5 357 - -
Lal10g1038 358 ProSitePatterns Protein kinases ATP-binding region signature. 79 102 IPR017441 GO:0005524
Lal10g1038 358 Pfam Protein kinase domain 74 333 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal10g1038 Lal-Chr10 17480449 17484268 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal10g1038 5 358 MAP Kinase Kinase Gene Family AT5G56580 83.944 0.0 623
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE7 Lal10g1038 Pkinase 5.8e-68 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal10g1038 K04368 - gmx:100786284 657.907