Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal10g1031 ATGACAACATTAAACAAATCATGTCTTAAGTTACTATTTTACTCTCTTCTAACTTTGTTCACCATTATCAGCCATGCAAACACTCAGTCTCAGCTATATGATCAAGAACATGCAGTCCTTTTGAAGATAAAGCAATACCTTCAAAACCCTTCTTTCCTCAATCACTGGACCTCATCAAACTCCTCACACTGTTCTTGGCCAGAGATCACTTGCAACAATGGTTCTATCACTGGACTTGCTCTTGTTAATATTGACATCAATCAAACAATACCAACTTCCTTATGTGACCTCAAAAACCTCACACATGTTGATTTCAACTTGAATTATATTCCTGGAGACTTTCCAACATATCTCTACAACTGTTCCAAGCTTGAGTACTTGGACCTCTCAATGAACAACTTTGTTGGTAAGATACCTGATGACATTGATAGCTTGTCTAATTTACAGTATCTGAACCTTAGTTACACCAACTTCACTGGTGACATTCCTGGCAGCATTGGAAGGCTAAAGGAACTGAGACATCTTCCACTTCAGTATTGTTTATTCAATGGAACTTATCCTGATGAGATTGGCAACTTGTCCAATCTTGAAACCTTGGATTTGTCTTCTAACTATGAGCTCCCTCCTTCGAAGTTGCCGTTGAGCTGGACCAAGTTGAACAAATTGAAGGTCTTTTATATGTATGGCTGCAACTTGGTTGGGGAAATTCCTGAAAACATTGGAGAAATGGTGGCTTTGGAGAAATTGGATATATCACAAAACAGTTTAACTGGACACATTCCAAGTGGCTTGTTCATGCTGAAGAATCTGAGCATACTCTATCTTTTTCAGAACACTCTTTCCGGGGAGATACCTAGCGTGGTTGAAGCATTAAATTTGACTATCATTGATCTCATAAACAATGATCTTACAGGGAAAATACCAGATGATTTTGGAAAGCTACAAAAGTTAACAGGCTTGAGTTTGTCACTGAATAAGTTATCAGGGGAGATACCAGAAAGTTTAGGCCTTCTTCCATCTCTGATCGATTTTCGCGTCTTTTTCAACAATTTATCAGGTAATCTTCCTCCTGACTTTGGTCGCTCCTCAAATCTAGGATCCTTTCACATTGCTTCCAATAATTTATCAGGAAAGTTACCAGAGAACTTATGCTATTATGGAGAGTTACTTAATTTAACTGCTTATGACAATAATCTCAATGGTGAGTTGCCAGAATCACTAGGAAATTGTAGTAGCCTGCTGGACTTAAAAATCTACAATAATCAGTTTTCCGGTACCATTCCTAGTGGTCTTTGGACATCTTTCAATTTGATGAATTTCATGGTAAGCCACAACAAGTTCACCGGTGTGCTTCCTGAAACATTGTCATCAAATATTTCGCGCTTCGAGATTAGTTATAATAGCTTTTCCGGTAGAATTCCTGCTGGAGTATCCTCCTGGACAGATGTGGCAGTGTTTGATGCCAGCAACAACTTCTTCAATGGAAGTATTCCACCAGAATTAACAACTCTTCCCAAATTAACCACTCTTTTGCTTGACCAGAACCAACTCATAGGGCCACTTTCATCAGAAATAGTATCATGGAAGTCTCTAGTAACTCTAAATTTAAGCGGAAACCAACTCTCTGGAAAAATTCCTGATGCAATTGGTCAGTTACCTGTCCTTAATCAGCTTGACTTATCAGAAAATGAATTGTCGGGCCAAGTACCTTCAAGTTTTCGAAGACTCACCAATCTCAATGTATCTTCCAATAACTTGACAGGGAAGGTTCCAAGTGAGTTTGAAAATTCTGCATATGCAAGTAGCTTTTTGGACAATCCTGGCCTTTGTGCTGATACACCAGCACTGAACCTTACCCTGTGTAATTCTAGCACTACTGAAAGTTCAAACAAGGATTCATCTTGGTCTCCAGCTTTGATTATAAGCCTTGTGGTAGTAGCCTTCTTACTGATTTGTTTGATGTCATTCTTGATTGTCAGACTACGCAGAAAAAGAAAGCAAGGACTTGATAATTCATGGAAGCTCATTTCCTTTCAGAGGCTGAATTTCACCGAATCGAACATAGTGTCTTCAATGACAGAACATAATGTCATTGGAAGTGGTGGATATGGTACGGTATACCGCATTGCTGTTGATGGTTTAGGCTACGTTGCTGTGAAAAAGATTATGAATAACAGAAAGTTAGAGAAGAAACTAGAGAGCTCTTTTCATGCTGAAGTTAAAGTATTGAGCAATATTCGTCATAACAACATTGTGAAGTTGTTGTGCTGTATATCCAATGAGGAGTCTATGCTGCTTGTATATGAGTATCTTGAAAACCGTAGCCTAGATAGGTGGCTGTACAAGAAGAGTAAGTCAACATCAAATGTTTCAGGTTCAGTCAATCATTTTGTCCTTGATTGGCCAAAGAGATTGCAAATAGCCATTGGAGTTGCTCAAGGTTTGAGCTACATGCACCATGATTGCTCATCACCTATTGTTCATAGAGATTTGAAAACAAGCAACATCATTTTGGATTCTCAATTCAATGCAAAGGTTGCTGATTTTGGTCTGGCTAGGATGTTGGTCAAGCCTAGTGAACTTGAGACCATGTCAAATGTGGTTGGCTCATTTGGATATATTGCTCCAGAATATGTTCAAACTACAAGAATCAGTGAAAAGATTGATGTCTTCAGCTTTGGTGTTATCCTATTGGAATTGACAACTGGTAAAAAAGCTAATAAAGGAGATGAACACACATCTCTTGCAGAATGGGCATGGCAGAAAGTTCAAGTAGGAAGCAACATAGAAGAGCTTCTAGACAAAGAAATAAAGGAACCAAGTTACTTGAATGAAATGTGTAATGTTTTCAAACTTGGTGTAATGTGTACTTCAACATTTCCAGATAGTAGACCTTCCATGAAAGAGGCCTTGCAAGTATTACTTAGGTGTGAAGAATCATTATCAAATGGAGAGAGGAATATTTGTCACTATGATGTTGTTCCTCTTCTTAGAGACTCAAAGAGGGAGGGTAAGTTGGATGTTGAAAATGATAACTAG 3039 0.3843 MTTLNKSCLKLLFYSLLTLFTIISHANTQSQLYDQEHAVLLKIKQYLQNPSFLNHWTSSNSSHCSWPEITCNNGSITGLALVNIDINQTIPTSLCDLKNLTHVDFNLNYIPGDFPTYLYNCSKLEYLDLSMNNFVGKIPDDIDSLSNLQYLNLSYTNFTGDIPGSIGRLKELRHLPLQYCLFNGTYPDEIGNLSNLETLDLSSNYELPPSKLPLSWTKLNKLKVFYMYGCNLVGEIPENIGEMVALEKLDISQNSLTGHIPSGLFMLKNLSILYLFQNTLSGEIPSVVEALNLTIIDLINNDLTGKIPDDFGKLQKLTGLSLSLNKLSGEIPESLGLLPSLIDFRVFFNNLSGNLPPDFGRSSNLGSFHIASNNLSGKLPENLCYYGELLNLTAYDNNLNGELPESLGNCSSLLDLKIYNNQFSGTIPSGLWTSFNLMNFMVSHNKFTGVLPETLSSNISRFEISYNSFSGRIPAGVSSWTDVAVFDASNNFFNGSIPPELTTLPKLTTLLLDQNQLIGPLSSEIVSWKSLVTLNLSGNQLSGKIPDAIGQLPVLNQLDLSENELSGQVPSSFRRLTNLNVSSNNLTGKVPSEFENSAYASSFLDNPGLCADTPALNLTLCNSSTTESSNKDSSWSPALIISLVVVAFLLICLMSFLIVRLRRKRKQGLDNSWKLISFQRLNFTESNIVSSMTEHNVIGSGGYGTVYRIAVDGLGYVAVKKIMNNRKLEKKLESSFHAEVKVLSNIRHNNIVKLLCCISNEESMLLVYEYLENRSLDRWLYKKSKSTSNVSGSVNHFVLDWPKRLQIAIGVAQGLSYMHHDCSSPIVHRDLKTSNIILDSQFNAKVADFGLARMLVKPSELETMSNVVGSFGYIAPEYVQTTRISEKIDVFSFGVILLELTTGKKANKGDEHTSLAEWAWQKVQVGSNIEELLDKEIKEPSYLNEMCNVFKLGVMCTSTFPDSRPSMKEALQVLLRCEESLSNGERNICHYDVVPLLRDSKREGKLDVENDN 1012
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal10g1031 1012 PANTHER LRR RECEPTOR-LIKE KINASE FAMILY PROTEIN 14 1005 - -
Lal10g1031 1012 Gene3D Transferase(Phosphotransferase) domain 1 771 992 - -
Lal10g1031 1012 ProSitePatterns Protein kinases ATP-binding region signature. 698 721 IPR017441 GO:0005524
Lal10g1031 1012 Gene3D Phosphorylase Kinase; domain 1 669 770 - -
Lal10g1031 1012 SUPERFAMILY L domain-like 42 376 - -
Lal10g1031 1012 Gene3D Ribonuclease Inhibitor 477 617 IPR032675 -
Lal10g1031 1012 Gene3D Ribonuclease Inhibitor 186 289 IPR032675 -
Lal10g1031 1012 CDD STKc_IRAK 698 976 - -
Lal10g1031 1012 ProSitePatterns Serine/Threonine protein kinases active-site signature. 826 838 IPR008271 GO:0004672|GO:0006468
Lal10g1031 1012 Gene3D Ribonuclease Inhibitor 290 380 IPR032675 -
Lal10g1031 1012 Gene3D Ribonuclease Inhibitor 381 476 IPR032675 -
Lal10g1031 1012 Pfam Leucine rich repeat 505 565 IPR001611 GO:0005515
Lal10g1031 1012 Pfam Protein kinase domain 694 972 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal10g1031 1012 SUPERFAMILY Protein kinase-like (PK-like) 685 974 IPR011009 -
Lal10g1031 1012 SUPERFAMILY RNI-like 290 593 - -
Lal10g1031 1012 Pfam Leucine rich repeat N-terminal domain 35 72 IPR013210 -
Lal10g1031 1012 PANTHER RECEPTOR KINASE-LIKE PROTEIN XA21 14 1005 - -
Lal10g1031 1012 ProSiteProfiles Protein kinase domain profile. 692 981 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal10g1031 1012 SMART serkin_6 692 981 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal10g1031 1012 Gene3D Ribonuclease Inhibitor 33 185 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal10g1031 Lal-Chr10 17441180 17445142 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal10g1031 30 1002 Receptor kinase-like Gene Family AT5G25930 50.252 0.0 928
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Lal10g1031 Pkinase 7.6e-51 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal10g1031 - - gmx:100798963 1483.39