Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal10g1028 ATGTTAATGCAGAACACTGCTCCTGCTCCTCCTCCACCAGGAGATTCTGAAAAGCAAGGTGTGACATTTAAGATTTCAGGAGATGCGACAATGTTCCTTGGCCGCAAATTTTTAGGAGCTCACGATACACTCAACGATAATCTTGGCAGACACTACTATAAGGATTGCTTAATTGAAGGCTCTATCGATTTTATATTTTGA 201 0.408 MLMQNTAPAPPPPGDSEKQGVTFKISGDATMFLGRKFLGAHDTLNDNLGRHYYKDCLIEGSIDFIF 66
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal10g1028 66 SUPERFAMILY Pectin lyase-like 14 66 IPR011050 -
Lal10g1028 66 MobiDBLite consensus disorder prediction 1 20 - -
Lal10g1028 66 MobiDBLite consensus disorder prediction 1 15 - -
Lal10g1028 66 Pfam Pectinesterase 14 66 IPR000070 GO:0030599|GO:0042545
Lal10g1028 66 Gene3D - 1 66 IPR012334 -
Lal10g1028 66 PANTHER PECTINESTERASE 3 66 - -
Lal10g1028 66 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 3 66 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal10g1028 Lal-Chr10 17426515 17426715 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal10g1028 5 66 Carbohydrate Esterase AT5G47500 62.903 3.92e-20 79.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal10g1028 K01051 - nnu:104604473 90.5077