Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal10g1025 ATGGGTTGTATCTATTCTAAGGTTTGCATAGGTGATACTTGTAGAGATTCCAGCATCAATGGTGATGCTATTACTAGACATGCTGCACTTTCTGAATCATCTTCTGATGTTCAACAAGGTGAAATCAGAGACCAATTGAACCGGTTTAGTTTAACCAGAGACCCTGAAGCTGGAATTAGAAGATTAGCTAGGGTTTCAGCACAGTTTCTTCCACCAGATGGGTCAAGAACCGTTAAGGTAGCTTCTAATGACTATGAATTAAGGTATTCTTATTTGTCGCAGCGAGGTTATTACCCTGATGATTTGGATAAGGCTAATCAGGACAGTTTCTGCATCCACACGCCATTTGGAACGAGTCCTGATGACCATTTCTTTGGAGTTTTTGATGGTCATGGTGAATTTGGAGCGCAGTGTTCGCAGTTTGTGAAGCGTAAGCTGTGTGAGAATTTACTCAGGAATAGTAAGTTTCATGTGGATGCTGTAGAGGCTTGTCACGGCGCATTCTTGGATACTAATTCTCAGTTACATGCTGATATTTTGGATGATAGCATGAGTGGCACGACTGCGATCACAGTGTTGGTTAGGGGAAGAACAATATATGTGGCAAATTCAGGTGATTCGAGGGCGGTGATTGGAGAGAGGAGAGGGAAGGATTTAGTGGCGGTTGATTTGTCGGTTGATCAGACACCTTTTAGGCCTGATGAGCTTGACAGGGTGAAGCTTTGTGGAGCTCGGGTTCTTACTTTGGATCAGATTGAAGGGCTTAAGAACCCTGATGTTCAGTGTTGGGGCACCGAAGAAGCTGATGATGGTGACCCTCCTAGGCTGTGGGTGCCCAATGGGATGTACCCTGGTACTGCTTTTACAAGGAGCCTAGGTGATTCTATTGCTGAGTCTATTGGTGTTGTTGCTAATCCTGAAATTCTTGTCTTTGAGCTCACAAGAAATCACCCTTTCTTTGTGCTTGCTAGTGATGGGGTCTTTGAGTTTCTGTCTAGCCAAACTGTGGTCGAAATGGTTGCCAAATTCAAAGATCCTCGTGATGCTTGTGCTGCAATAGTGGCTGAATCTTATAGACTCTGGCTGCAGTGTGAAACTCGTACTGATGATATTACAATCATTATTGTGCATATCAATGGGCTAACTGAACCTGCTGTTGGTCAGTCAGCAAGTTATGGTGATGTTCTACCAACCGGAGTGCCTCATGCTGTAGAGGTGACAGGTTCAGAATCTCCTTCCACCTTTGGCTTGAACTCTAGGAATCATCGTATAAGGCATGACTTGTCAAGGGCACGTCTCCGAGCAATTGAAAATTCCCTAGAGAACGGGCAAGCTTGGGTTCCTCCATCTTCAGCCCATAGGAAGACATGGGAAGAAGAAGCACACATAGAGCAAGCGTTGCAGGATCATTTTCTCTTCAGAAAACTGACTGACTCTCAATGTCATGTTTTATTGGATTGCATGCAAAGAATTGAGGTCAAAGCTGGGGATATTATAGTCCAGCAGGGTGGTGAAGGTGACTGTTTTTATGTTGTTGGTAGTGGAGAATTTGAGGTCTCGGCAACTCAGGAAGAAAAAGATGGGGAAGTACCTAGGGTTTTGCAGCACTATACAGCTGAAAAACTATCATGCTTTGGAGAACTTGCTCTAATGTACAATAAACCACTCCAGGCCTCTGTACGTGCTGTAACAAATGGAACTCTCTGGGCTTTAAAGCGAGAAGATTTTCGAGGGATTTTAATTTCGGAGTTCTCCAATTTATCATCCTTGAAATTGCTTCGGTCCATAGATCTTCTCTCTAGGTTGACAATTTTGCAACTGAGTCAGATTTCAGACTCCCTTTCTGAAGTTTCCTTCTCAAGTGGGCAGACAATAATTGATAAAGATGAAGCCCTTGCATTGTACATTATCCAAAAGGGACAAGTGAAAATCACTTTTAATTCTGATATATTGACTTGTCCAATTGCCTGCAGCCTCAAGCCTGACATCGAAAATGAAGATGATAATGCACAGAGCAGAAGAGAACTATCAATAGAGAAGCCTGAGGGAAGCTATTTTGGCGAATGGGCCCTTCTTGGTGAACATATTGGTTCCTTAAGTGCTGTAGCTGTTGGTGATGTTGTATGTGCTGTACTAACAAAGGAGAATTTTGAATCAGTTATTGGCTCCTTGCAAAAGCTTTCAAATGAAGATCTCAAGTTGAGGGATAATTCCAAGCAGTTGAGTGGAAACTTTGAATTTTCATCCCTTGATAAAGTCCAGCTCTCAGATTTGGAGTGGAGAAAGACACTATATTCCACTGACTGCTCTGAGATCGGGCTTGCAAATTTAAGAGACTCAGAAAACTTGCTGACATTGAAGAGATTTTCTAAGCCAATGGTGAAAATGCTAGGAAAAGAAGCACAAGTCTTGAAGGAGAAAGACTTGATTAAGGGTATGAGCTCTTCAGCTTGTATACCACAGGTTTTCTGCACTTCTGCTGACCACATATATGCTGGAATACTGCTAAATACATGCCTCGCATGCCCTTTGTCTTCCATACTTTCAAGTCCTCTGGGTGAATCAGCGGCACGGTTCTGTGCTGCTTCTGTTGTTACTGCTTTAGAAGACTTGCACAAGAATGGTGTTCTCTATAGAGGTGTATCACCTGATGTTTTGATGTTGAACCAAACAGGACAGATACAGTTGGTGGACTTCAGATTTGGTAAGAGGCTATCTGATGAGAGAACATTCACGATTTGTGGGATGGCAGATTCGCTAGCTCCGGAGATTGTTTTGGGAAAAGGCCATGGCTTCCCTGCTGACTGGTGGGCGCTGGGAGGTGAGATGCCATTTGGATCATGGAGAGAAAATGAACTTGATACAGTTGCCAAAATTGCAAAACGGAAGCTATATCTTCCCGAGACTTTCAGCCCTGAAGCTGTTGATCTCATCTCTAAGTTACTTGAGGCCGAAGAAAACACTAGACTTGGTAGCCAAGGTTCTGATTCTGTCAAAAGTCATCCATGGTTTAATGGTATTGACTGGGAAGGGATTAGACACCATACATGTCCTGTTCCTAAGGAAATAATTTCTCGGATAACACAATACTTGGAAGTTCATTCTGAGGATTGTACTGGTTCTCTAGGTTCTCCATCACAGGAAGTAGAAGAACTTAATGTACCTGAATGGCTTGAAGACTGGTAA 3186 0.4306 MGCIYSKVCIGDTCRDSSINGDAITRHAALSESSSDVQQGEIRDQLNRFSLTRDPEAGIRRLARVSAQFLPPDGSRTVKVASNDYELRYSYLSQRGYYPDDLDKANQDSFCIHTPFGTSPDDHFFGVFDGHGEFGAQCSQFVKRKLCENLLRNSKFHVDAVEACHGAFLDTNSQLHADILDDSMSGTTAITVLVRGRTIYVANSGDSRAVIGERRGKDLVAVDLSVDQTPFRPDELDRVKLCGARVLTLDQIEGLKNPDVQCWGTEEADDGDPPRLWVPNGMYPGTAFTRSLGDSIAESIGVVANPEILVFELTRNHPFFVLASDGVFEFLSSQTVVEMVAKFKDPRDACAAIVAESYRLWLQCETRTDDITIIIVHINGLTEPAVGQSASYGDVLPTGVPHAVEVTGSESPSTFGLNSRNHRIRHDLSRARLRAIENSLENGQAWVPPSSAHRKTWEEEAHIEQALQDHFLFRKLTDSQCHVLLDCMQRIEVKAGDIIVQQGGEGDCFYVVGSGEFEVSATQEEKDGEVPRVLQHYTAEKLSCFGELALMYNKPLQASVRAVTNGTLWALKREDFRGILISEFSNLSSLKLLRSIDLLSRLTILQLSQISDSLSEVSFSSGQTIIDKDEALALYIIQKGQVKITFNSDILTCPIACSLKPDIENEDDNAQSRRELSIEKPEGSYFGEWALLGEHIGSLSAVAVGDVVCAVLTKENFESVIGSLQKLSNEDLKLRDNSKQLSGNFEFSSLDKVQLSDLEWRKTLYSTDCSEIGLANLRDSENLLTLKRFSKPMVKMLGKEAQVLKEKDLIKGMSSSACIPQVFCTSADHIYAGILLNTCLACPLSSILSSPLGESAARFCAASVVTALEDLHKNGVLYRGVSPDVLMLNQTGQIQLVDFRFGKRLSDERTFTICGMADSLAPEIVLGKGHGFPADWWALGGEMPFGSWRENELDTVAKIAKRKLYLPETFSPEAVDLISKLLEAEENTRLGSQGSDSVKSHPWFNGIDWEGIRHHTCPVPKEIISRITQYLEVHSEDCTGSLGSPSQEVEELNVPEWLEDW 1061
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal10g1025 1061 SUPERFAMILY cAMP-binding domain-like 591 727 IPR018490 -
Lal10g1025 1061 ProSiteProfiles PPM-type phosphatase domain profile. 88 378 IPR001932 -
Lal10g1025 1061 CDD CAP_ED 598 722 IPR000595 -
Lal10g1025 1061 PANTHER PROTEIN PHOSPHATASE 2C AND CYCLIC NUCLEOTIDE-BINDING/KINASE DOMAIN-CONTAINING PROTEIN 27 1061 - -
Lal10g1025 1061 Gene3D Jelly Rolls 585 739 IPR014710 -
Lal10g1025 1061 Pfam Cyclic nucleotide-binding domain 491 580 IPR000595 -
Lal10g1025 1061 Pfam Cyclic nucleotide-binding domain 617 721 IPR000595 -
Lal10g1025 1061 CDD CAP_ED 472 580 IPR000595 -
Lal10g1025 1061 PANTHER CYCLIC NUCLEOTIDE-DEPENDENT PROTEIN KINASE 27 1061 - -
Lal10g1025 1061 ProSiteProfiles cAMP/cGMP binding motif profile. 598 722 IPR000595 -
Lal10g1025 1061 SMART cnmp_10 598 736 IPR000595 -
Lal10g1025 1061 SMART cnmp_10 472 596 IPR000595 -
Lal10g1025 1061 Pfam Protein phosphatase 2C 117 357 IPR001932 -
Lal10g1025 1061 ProSiteProfiles Protein kinase domain profile. 758 1004 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal10g1025 1061 SUPERFAMILY cAMP-binding domain-like 453 581 IPR018490 -
Lal10g1025 1061 Gene3D Transferase(Phosphotransferase) domain 1 843 1020 - -
Lal10g1025 1061 SUPERFAMILY PP2C-like 79 380 IPR036457 -
Lal10g1025 1061 CDD PP2Cc 104 378 IPR001932 -
Lal10g1025 1061 SUPERFAMILY Protein kinase-like (PK-like) 749 1032 IPR011009 -
Lal10g1025 1061 ProSitePatterns PPM-type phosphatase domain signature. 124 132 IPR000222 GO:0043169
Lal10g1025 1061 Pfam Protein kinase domain 777 1004 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal10g1025 1061 PRINTS cAMP-dependent protein kinase signature 493 507 - -
Lal10g1025 1061 PRINTS cAMP-dependent protein kinase signature 508 522 - -
Lal10g1025 1061 PRINTS cAMP-dependent protein kinase signature 543 552 - -
Lal10g1025 1061 PRINTS cAMP-dependent protein kinase signature 717 729 - -
Lal10g1025 1061 ProSiteProfiles cAMP/cGMP binding motif profile. 472 580 IPR000595 -
Lal10g1025 1061 Gene3D Jelly Rolls 438 580 IPR014710 -
Lal10g1025 1061 Gene3D - 76 379 IPR036457 -
Lal10g1025 1061 SMART serkin_6 766 1004 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal10g1025 1061 Gene3D Phosphorylase Kinase; domain 1 756 842 - -
Lal10g1025 1061 SMART PP2C_4 80 376 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal10g1025 Lal-Chr10 17400057 17408372 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal10g1025 1 1061 PP2C-type Phosphatase Gene Family AT2G20050 67.213 0.0 1448
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_PKA-PKG Lal10g1025 PP2C 1.3e-33 CL0238
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal10g1025 - - gmx:100799821 1846.25
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal25g0419 25 2849634 2859202 Lal10g1025 10 17400057 17408372 LSH