Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal10g1023 ATGGCTTCTTCAATTCTTCCCTTCACGTTACCTTCTCTCTCTTCCTTCAACCCTTCTCAAAGGCCCAATCTTTTTCATCTTCGTAGTGCTGTTTCACAGTCCCAAAATTTTGGCTTGAAAGCATCCAGATTGTTGAGACAAGATGATAAATGCCTCAGTGTGATGGCATCTGGGAACTTGTCCTATGCTGTTACACAGGAACATGTACTAAATTGGGTCAAACAAGACAACCGAAGAATGCTTCATGTTGTATATCGTGTCGGCGACTTAGACAGGACCATAAGATTTTATGCTGAGTGCCTGGGAATGAAGGTGCTTAGAAGGCGTGACATGCCGGAGCAGAGATATACTAATGTCTTTCTTGGATATGGGCAGGAACATGCACACTTTGTTATTGAATTGACATACAATTATGGGATTGACAGTTATGGAATTGGAAATGGGTTTGGCCATTTTGGTCTTGCTGTTGATGATGTTTCAAGAACAGTGGATATTGTAAGAGTGAAGGGTGGGAAAATAACTAGGGAACCTGGTCCTATCAGGGGAAGGAGCTCAGTAAGTGCATTAATTGAAGATCCTGATGGTTATACATTTGAACTTTTGGAAAGGCCTCCATCTCCAGAGCCTTTGTGCAAAGTAATGCTTCGAGTAGGCGATCTTAATCGTTCCATAAAATTTTACGAAAAGTCTACTGTAGCAATGATGGGTTATGGTCCAGAAGACAAAAATACTGTTCTGGAGTTGACTTACAACTATGGAGTTACAGAATATGATATTGGAGATGCTTATGCTCAGATTGCAATAGGCACAAATGATGTATACAGAACTGCAGAAGCAATTAAACTTGCAGGAGGAAAGGTTACTCGGGAACCTGGACCGGTACCTGGTATCAATACAAAGATTACAGCATGCATCGATCCCGATGGTTGGAAAACGGATCCTCCTTTGAAACTCCTCAACGATGTGTCACTCATCATCCAAATTGGTCCAATATCTATTGGAGCATGTTGGGAATTGGATACTTCTCACAGAAAGAATGAGAAAGAGAATGAAAGAGCAAAGAAAGCTCATGAAAGAGAAAGATGA 1086 0.4116 MASSILPFTLPSLSSFNPSQRPNLFHLRSAVSQSQNFGLKASRLLRQDDKCLSVMASGNLSYAVTQEHVLNWVKQDNRRMLHVVYRVGDLDRTIRFYAECLGMKVLRRRDMPEQRYTNVFLGYGQEHAHFVIELTYNYGIDSYGIGNGFGHFGLAVDDVSRTVDIVRVKGGKITREPGPIRGRSSVSALIEDPDGYTFELLERPPSPEPLCKVMLRVGDLNRSIKFYEKSTVAMMGYGPEDKNTVLELTYNYGVTEYDIGDAYAQIAIGTNDVYRTAEAIKLAGGKVTREPGPVPGINTKITACIDPDGWKTDPPLKLLNDVSLIIQIGPISIGACWELDTSHRKNEKENERAKKAHERER 361
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal10g1023 361 Coils Coil 343 361 - -
Lal10g1023 361 PANTHER LACTOYLGLUTATHIONE LYASE-LIKE PROTEIN 9 312 - -
Lal10g1023 361 ProSitePatterns Glyoxalase I signature 1. 82 103 IPR018146 GO:0004462|GO:0046872
Lal10g1023 361 Gene3D - 52 203 IPR029068 -
Lal10g1023 361 TIGRFAM glyox_I: lactoylglutathione lyase 67 211 IPR004361 GO:0004462|GO:0046872
Lal10g1023 361 ProSiteProfiles Vicinal oxygen chelate (VOC) domain profile. 209 317 IPR037523 -
Lal10g1023 361 Gene3D - 207 314 IPR029068 -
Lal10g1023 361 SUPERFAMILY Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase 78 229 IPR029068 -
Lal10g1023 361 PANTHER LACTOYLGLUTATHIONE LYASE 9 312 - -
Lal10g1023 361 CDD GlxI_Ni 80 201 - -
Lal10g1023 361 Pfam Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 213 310 IPR004360 -
Lal10g1023 361 Pfam Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 80 200 IPR004360 -
Lal10g1023 361 ProSitePatterns Glyoxalase I signature 2. 146 158 IPR018146 GO:0004462|GO:0046872
Lal10g1023 361 SUPERFAMILY Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase 211 310 IPR029068 -
Lal10g1023 361 ProSiteProfiles Vicinal oxygen chelate (VOC) domain profile. 79 203 IPR037523 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal10g1023 Lal-Chr10 17388333 17392566 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal10g1023 80 202 Calmodulin-binding Proteins AT1G08110 31.081 2.02e-15 73.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal10g1023 K01759 - gmx:100781439 471.855
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal23g0611 23 8868784 8877364 Lal10g1023 10 17388333 17392566 PCT
Lal10g1023 10 17388333 17392566 Lal23g0611 23 8868784 8877364 PCT