Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal10g1018 ATGAATAGAGGTGTTCTTCAAAGCTCACCAGTGCAACAAATGATGGGTGGGAACCCTAACTGGTGGAACATCAATACTATGAGGCCTCCTAATGTTCCACAAACTCCTCCTTTCTTCTCCACTACTCCTTCTAACTTTCTCACTCCATACCCTCAAACTTCTTCTTTTCCTTTCACTTCTTTGCATGACAATCAAGACCTTCCTGAGTCATGGAGCCACCTTCTCATGGATGGACTTGTGGGGGAAGAAGATAAAGGTAGTATGGATCAGTTTCAAACTAAGAGGATAGAGAACTGTTGGGAGGGTCAAATGCTAAGTCAGGCTCCAAATGTTTCTTTTGTGGATGTTAAACAAGAAGGGTCAGTTAATAGCTATGTGTATGGCCATGGAAATGAACATGAACTTCAAAAACCAAAGACTACTACTTGGTCTCCAAATTCATGTGTTACTAGTTTCAGCAACAACATGCTTGATTTTTCTAACAATAAGAATGATGCAAGGCATCCACCACCAGATCCATCTTCTGAGTGCAACAGCACTGGTGGTGGTGGGGCACTGAAGAAAGCTAGGGTTCAACCTTCCACAACTCAGTCTACTATGAAGGTTAGGAAGGAGAAGTTAGGTGACAGAGTTACAGCACTTCATCAACTTGTTTCCCCATTTGGGAAGACTGACACAGCATCTGTCTTGTTAGAAGCTATTGGGTATATCAGATTCCTTCAGAGTCAAATTGAGGCCCTTACCTTACCATACTTGACCACTGGATCAGTAAACCCGAGGCACCAACACTCAGTTCAAGGAGAGAAGAATTGTATATTTCCTGAAGACCCTGGTCAGCTGGTGAATGAAAACTGCTTGAAAAGGAAGGCACCTATTGAGCAGGATTCTCAAGAAGAACCAAATAAGGACCTAAAGAGTAGAGGGTTGTGCCTAGTTCCAGTGTCATGCACACAGCAAGTTGGAAGTGAGAGTGGAGCTGATTATTGGGCACCTGCCCTTGGAGGAGGCTTTCAGTAG 1017 0.4366 MNRGVLQSSPVQQMMGGNPNWWNINTMRPPNVPQTPPFFSTTPSNFLTPYPQTSSFPFTSLHDNQDLPESWSHLLMDGLVGEEDKGSMDQFQTKRIENCWEGQMLSQAPNVSFVDVKQEGSVNSYVYGHGNEHELQKPKTTTWSPNSCVTSFSNNMLDFSNNKNDARHPPPDPSSECNSTGGGGALKKARVQPSTTQSTMKVRKEKLGDRVTALHQLVSPFGKTDTASVLLEAIGYIRFLQSQIEALTLPYLTTGSVNPRHQHSVQGEKNCIFPEDPGQLVNENCLKRKAPIEQDSQEEPNKDLKSRGLCLVPVSCTQQVGSESGADYWAPALGGGFQ 338
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal10g1018 338 CDD bHLH_AtbHLH_like 201 247 IPR045239 -
Lal10g1018 338 Gene3D - 194 250 IPR036638 GO:0046983
Lal10g1018 338 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 201 253 IPR036638 GO:0046983
Lal10g1018 338 MobiDBLite consensus disorder prediction 159 199 - -
Lal10g1018 338 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 16 324 - -
Lal10g1018 338 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 191 240 IPR011598 GO:0046983
Lal10g1018 338 PANTHER OS05G0228400 PROTEIN 16 324 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal10g1018 Lal-Chr10 17350717 17355748 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal10g1018 1 280 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G29100 46.307 3.77e-69 218
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal10g1018 - - gmx:100785156 508.064