Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal10g0984 ATGTCAAGGGCAAGGGACAGAACTGAAGATTTCAAAGATGCCGTGCGCCACACGGCTCGCTCTTTGGGTTTCGACGAGGTTAAATTGGCATCAGTTATGGCATCTTTAATTATTCATAAACCTTGGCAAAGATTACCATTTTCCAACGCAGCGCTGAAGACGCTTGAGAGTATTGGAGAACTGGAACAGTTTCTGTTGAAGCATAGAAAGGATTATACTGATCTGCACCGCACAACTGAACAGGAGAGAGATAGCATTGAGAATGAAGTTAGTTCTTTTATTAAAACGTGCCAGGAACAAATTGATGTTCTTAAGAATAGTATAAATCATGAAGAAGAAAATTCAAAAGGTTGGCTTGGCATTGCAAGTGCAAAGTCTAATGCTGACACCATTGCCCACAAACATGGGGTGGTTCTAATTTTAAGTGAGAGACTCCACTCAGTTTCGGCACAGTTTGATCAGCTAAGAGCTGTACGCTTCCAGGATGCTATTAACAGGGCAATACCAAGGAGAAAACTTAATCGTGTGACCAAGAAAGAGACTGCAGAAACCCCTAATTTGGGTGACATGGAGCTCAAAGAACACGATGAGTTGAGCAGTGAGCCTCTAAGAGTCCAACAACAACTCTTGGATCATGAAACACGTGCCCTTCAGGTGGAATTAAGTAGTCTCTTAGATACAGTTCAGGAAACAGAAACTAGGATGGTGGAAATGTCTGCACTTAATCATCTCATATCTACCCATGTTCTGCAACAAGCTCAGCAAATTGAGCATCTGTATCAGCAGGCTGTTGAAGCTACTATGAATGTTGAGCTTGGTAACAAAGAACTGTCACAGGCCATTCAGCGAAATAGCAGTAGCAGGACATTTCTTTTGCTCTTCCTATTTGTCCTAACCTTTTCCATCCTCTTTCTTGATTGGTACAGTTAA 930 0.4194 MSRARDRTEDFKDAVRHTARSLGFDEVKLASVMASLIIHKPWQRLPFSNAALKTLESIGELEQFLLKHRKDYTDLHRTTEQERDSIENEVSSFIKTCQEQIDVLKNSINHEEENSKGWLGIASAKSNADTIAHKHGVVLILSERLHSVSAQFDQLRAVRFQDAINRAIPRRKLNRVTKKETAETPNLGDMELKEHDELSSEPLRVQQQLLDHETRALQVELSSLLDTVQETETRMVEMSALNHLISTHVLQQAQQIEHLYQQAVEATMNVELGNKELSQAIQRNSSSRTFLLLFLFVLTFSILFLDWYS 309
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal10g0984 309 Coils Coil 69 89 - -
Lal10g0984 309 Gene3D - 211 306 - -
Lal10g0984 309 PANTHER SYNTAXIN-18 5 309 - -
Lal10g0984 309 PANTHER SYNTAXIN-18 5 309 - -
Lal10g0984 309 Coils Coil 94 114 - -
Lal10g0984 309 SUPERFAMILY t-snare proteins 56 273 IPR010989 GO:0016020|GO:0016192
Lal10g0984 309 Pfam SNARE-complex protein Syntaxin-18 N-terminus 6 86 IPR019529 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal10g0984 Lal-Chr10 17094898 17098653 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal10g0984 65 309 SNARE and Associated Proteins AT1G51740 73.984 4.22e-113 325
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal10g0984 K08492 - gmx:100778011 516.924
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal8g0424 8 2856552 2861308 Lal10g0984 10 17094898 17098653 LSH