Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal10g0962 TCTAATTTGTTATCACCCTTCATAAACAAGTCTAAGTTATCAATAATGGGAATCATCATGACAGAAAAAATGAAACTTCTTGTGGCATTACTTACTCTTCAGTTCTGCTTTGCAGGATTTCACATTGTGTCTAGACTAGCACTAAACATTGGTGTCAGCCAAGTTGTTTATCCTGTTTACAGAAATATAATTGCCTTGCTTTTGTTGACCCCACTTGCTTATTTACTAGAGAAGAATCAAAGACCACCTCTTACTCTACCTTTACTAATTCAGTTCTTCCTATTAGCATTAATAGGGATCACTGCAAACCAAGGATTTTACTTGCTGGGTTTATATTATGCTTCTCCAACTTTTGCTTCTGCAATGCAAAACTCTGTTCCTGCCATCACTTTTGTCCTGGCCTCAGCTTTAGGACTTGAGGAGGTAAACATTACTAGGAAAGATGGATTGGCAAAAATTCTTGGAACCATTGCATGTGTGGGAGGTGCCACAATAATCACCCTCTACAAAGGCCTTCCTCTACTTCAACAACAGACTCACGAAATCGACGGAGATAAGTTCGAAGTAGATCAGTCTTCAACTAAAAATCAAAATTGGACATTGGGTTGCTTATACTTGCTTGGACATTGTTTATCATGGGCTGGTTGGATGGTTTTTCAGGCTCCTGTGGTGAAGAAGTATCCAGCAAAGTTAACACTCACTTCATTTACTTGCTTCTTTGGATTGATCCAATTCTTGATCATAGCAGCCTTTGTAGAAACAGACTTGGAGCATTGGAAGATACAATCAATGGAGGAGCTTTTTACTATCCTATATGCAGGAATCGTAGCATCCGGCATTGTCATTTCTCTCCAAACATGGTGTATTCAAAAGGGTGGCCCTGTGTTTGTAGCTGTTTTCCAACCCATGCAAACTATTCTAGTTGCTGTCATGGCAGCCTTAATTCTTGGTGATCAGTTATACTCTGGAGGGATTATTGGTGCAATTCTTATTGTGTTTGGTCTCTACTTAGTCCTATGGGGCAAAACCAACGAAAAAAAGGTGAATGAACCATCATTGACAAAGCCCTTGCTTAATGCTGAAGAGAAGACTAAAGAAGCAGATGCAACTTCTAAAGACATACCATGA 1128 0.3936 SNLLSPFINKSKLSIMGIIMTEKMKLLVALLTLQFCFAGFHIVSRLALNIGVSQVVYPVYRNIIALLLLTPLAYLLEKNQRPPLTLPLLIQFFLLALIGITANQGFYLLGLYYASPTFASAMQNSVPAITFVLASALGLEEVNITRKDGLAKILGTIACVGGATIITLYKGLPLLQQQTHEIDGDKFEVDQSSTKNQNWTLGCLYLLGHCLSWAGWMVFQAPVVKKYPAKLTLTSFTCFFGLIQFLIIAAFVETDLEHWKIQSMEELFTILYAGIVASGIVISLQTWCIQKGGPVFVAVFQPMQTILVAVMAALILGDQLYSGGIIGAILIVFGLYLVLWGKTNEKKVNEPSLTKPLLNAEEKTKEADATSKDIP 375
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal10g0962 375 PANTHER WAT1-RELATED PROTEIN 22 355 IPR030184 GO:0016021|GO:0022857
Lal10g0962 375 SUPERFAMILY Multidrug resistance efflux transporter EmrE 60 168 - -
Lal10g0962 375 Pfam EamA-like transporter family 201 339 IPR000620 GO:0016020|GO:0016021
Lal10g0962 375 Pfam EamA-like transporter family 28 165 IPR000620 GO:0016020|GO:0016021
Lal10g0962 375 SUPERFAMILY Multidrug resistance efflux transporter EmrE 258 343 - -
Lal10g0962 375 PANTHER WAT1-RELATED PROTEIN 22 355 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal10g0962 Lal-Chr10 16926835 16928955 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal10g0962 19 369 Nodulin-like Gene Family AT3G18200 67.680 9.07e-178 497
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal10g0962 - - gmx:100812601 575.089
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal10g0962 10 16926835 16928955 Lal10g0962 10 16926835 16928955 ECH