Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal10g0959 ATGACTCCACGCGCTGATGAATACGAAGAAGATAATCTCTCTTCAACCGACGACGAAGACGAAGACGATGTTGCATTAAAAGAAGACATGGCCGCGTTATCACGTGCATGTATGCTCGTCTCCGCCACCACTGGTGACGCCGTCACCGCTCGGAGCAAAAACGACCACCGTGAACTCATCCTTCACCACGATGATGATGATGATGATGATAGTGGAGGGATTCTATTAGAGGATCCTCTCTTGGAATCCGGTGATGCTATTGTACCTTTGAAGAACATTGATGATGATGATGATGATGATGATGATTTGGAATGTCTTAGACGAGTTGAGAGCTTGTACCAGCCTCTTGCTTCTCTTCCGCCGCTGTCGCCGATGAGGATAACGATGATGACTGCCTCTGATGATAATGATAATGACGAGGATGATGAGGATGATTTGGAGACGCTTTGTGCCATTCGCTCGCGGTTCTCTAGCTACAATGAAGGCGGTATGGAAACACTGGTTGAGGGAGATCAAACCTCATGTCTAGGCCATGAGGGTGAGACTGCCCATGGCTCTGTATCTGACAGATGGGATGTTGGTGAATTCTGTGATGCTTCTCCAATTCAGGATAATGCGACTGACTCTTTTCCTAGTAACGTTGAAGTGGAGCATTGTGGTTTAATTGACAGTCATGACCAGGATGCTTGCAGTTTGTCCAAGCTACCGCAGAAAAGATCAAGCTTTCCTCCATCGGCTCAGGCCTTTATTGATGCCATTAATAAGAACAGATCTATGCAGCGGTTTCTCAGAAGTAAGCTGATTGAGATTGAAGCAAAAATTGAGGAGAACAAACAGCTATGGGACAAAGTCAAAGTCATGAAGGACTTCCAGGCTGCATGCATTAGAAGAACAGGGAGTGCTTTATCACTAAAAAAGGATCCCCGTGTTCAGTTAATATCAGCAAAGAAATCTTCTGCTCCAAATAGCTCAAAGAGCCATAAGAAAAAAATATCTGCAATGTGTTATGGCCCAGCTGAGAATTCTCATGTCTCTAATTATAAGATGGTTTTAGAAAGATTTCCACTTTCATTGGATCGTAAAAAATGGACAAATGCAGAAAGGGAAAATCTTAAGAAGGGAATTAAGCAACAATTCCAAGAAATGGTGCTTCAAAATTCAGCAGATAGAATAAGTTCAGAGTGCTCAGATGGATATGGAAATGACATCGATAGCATAATTGCATCTGTTAATGATCTTGAAATCACACCCGAGGATATTAAAAAATTTATACCTCAAGTTAATTGGGATAAATTAGCTTCAACATATGATGTTGGTCATACTGGTGCTGAATGTGAATCTAGGTGGTTGAATTATGAAGATCCCCTGATAAACCATGACCCATGGACAGGCGAAGAGGATAAATCTCTTTTGCTTACTGTCCAAATTACGGGCATTAGGAACTGGTCTGGTATTGCTGAATTATTGGCCACAAATAGGACTCCATTTCAATGCTTAGCACGATACCAAAGGAGCTTAAATGCCTCTATGCTAAATAGTGAATGGACTGAGGAAGAAGATGCTCAACTTTGTTCTGCTGTAGCATTTTATGGTGAGCAGGATTGGCAGTCTGTGGCTTCTGTTTTAGAACGGCGCACGGGAACCCAATGCTCAAATAGATGGAAAAAATCGCTTTATCCTGATAAGAAAGGGAGCTTTACGCGAGAGGAGGATGAACGCTTAACAGTAGCTGTCATGCTTTTTGGACGGAAATGGAGTCAAGTAGCTAAATTTGTTCCAGGCCGAATCCAGTCTCAGTGTAGGGACAGATACCTCAATAGTTTGGATCCTTCGTTGAAATGGGGTGGATGGACAAAGGAAGAGGATTCAAGATTAAAAGATGCAATTGGCAAGCACGGATTCTGCTGGTCTAAGGTTGCTGAAGATATGCCTCCTCGTACTGATTCTCAATGCCGGAAGAGGTGGAGGGTGCTATGTCCTGATCAAGTTCCTTTGCTTCGAGATGCTAGAAAGATGCAAAAGTTAACTCTTAATAGTAACTTTGTTGATCGAGAATCTGAACGCCCAGCACTCACACTGAAGGACTTTCTTCCTTTACCTATGTTACCTTCACCATCTGATGCTGCTGATGATGTGAAACTCCCTAGAAAGCGAAAGTGGAAGTGGAGCAATGTTTCAAAGAAAATGCGATCAAAAAGACAAGCAAGAAATGCTCAAGTTTGTCTAAAGGATATAGCATTTAGTGATGGGGTCAAAACTTGTGATGAAGATGCTGTCAACATGGCATGTTTACGAAAGAGTAATTTCTTTCCAACCAATGACCAAGGGGATTTAACTCGGCAAGATGCAAGTGAGAAGTTTCTGTATTTTAATCCAATATGGAAATGGAAGGGTTGTACTGGACGAAACCAAGAGAACTGGAGTGGTACATTACCTTGTGAAAGTCCAGCATCTATGACTAGCAGAGGTGCTGAACCATCAGAACACAAACGAAAGACCAAAATGCGAAAACCTGGAAGCTTATCTGCTTGTGTGGAGAGTTTGGATCAAGACGGGGACATTACTCTCGCTTCCTTGTTAAACCGCAAACCAAAGAAGAACATAGCTTCTCACCGACAAGTGAAAAAACAGGATGTAATGATTGATGATGATAATGTGACGCTTGCTTGCCTTATGGCAAACAAATCGAAGAAACCAAGTGAAGCTGCTAAAGGACGGCGTGCCCGCTGCTCTACTTCGAAATTGAAAAAAGGATCTGTGATACTTCCTGAGGTGCTTTGTGCAAACAAGCCAACCACCATAGCTGATGGCAATGAGCTGTCATTGTCAAAGCTTGTTGAAGAGCAGCCTGTTTCCGATGGTGCTGTGGCTGAACCCACAAACATCAATGCGGATGAAGATGACTTGCTTGCTAACTTCGTGAAAAATAAGAAAAGGAAACAGCGAAAGAGAGCTCGAATCGGATGA 2967 0.4277 MTPRADEYEEDNLSSTDDEDEDDVALKEDMAALSRACMLVSATTGDAVTARSKNDHRELILHHDDDDDDDSGGILLEDPLLESGDAIVPLKNIDDDDDDDDDLECLRRVESLYQPLASLPPLSPMRITMMTASDDNDNDEDDEDDLETLCAIRSRFSSYNEGGMETLVEGDQTSCLGHEGETAHGSVSDRWDVGEFCDASPIQDNATDSFPSNVEVEHCGLIDSHDQDACSLSKLPQKRSSFPPSAQAFIDAINKNRSMQRFLRSKLIEIEAKIEENKQLWDKVKVMKDFQAACIRRTGSALSLKKDPRVQLISAKKSSAPNSSKSHKKKISAMCYGPAENSHVSNYKMVLERFPLSLDRKKWTNAERENLKKGIKQQFQEMVLQNSADRISSECSDGYGNDIDSIIASVNDLEITPEDIKKFIPQVNWDKLASTYDVGHTGAECESRWLNYEDPLINHDPWTGEEDKSLLLTVQITGIRNWSGIAELLATNRTPFQCLARYQRSLNASMLNSEWTEEEDAQLCSAVAFYGEQDWQSVASVLERRTGTQCSNRWKKSLYPDKKGSFTREEDERLTVAVMLFGRKWSQVAKFVPGRIQSQCRDRYLNSLDPSLKWGGWTKEEDSRLKDAIGKHGFCWSKVAEDMPPRTDSQCRKRWRVLCPDQVPLLRDARKMQKLTLNSNFVDRESERPALTLKDFLPLPMLPSPSDAADDVKLPRKRKWKWSNVSKKMRSKRQARNAQVCLKDIAFSDGVKTCDEDAVNMACLRKSNFFPTNDQGDLTRQDASEKFLYFNPIWKWKGCTGRNQENWSGTLPCESPASMTSRGAEPSEHKRKTKMRKPGSLSACVESLDQDGDITLASLLNRKPKKNIASHRQVKKQDVMIDDDNVTLACLMANKSKKPSEAAKGRRARCSTSKLKKGSVILPEVLCANKPTTIADGNELSLSKLVEEQPVSDGAVAEPTNINADEDDLLANFVKNKKRKQRKRARIG 988
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal10g0959 988 ProSiteProfiles Myb-like domain profile. 507 558 IPR001005 -
Lal10g0959 988 Gene3D - 513 562 - -
Lal10g0959 988 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 454 510 IPR017930 -
Lal10g0959 988 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 563 608 IPR017930 -
Lal10g0959 988 SUPERFAMILY Homeodomain-like 511 604 IPR009057 -
Lal10g0959 988 CDD SANT 514 558 IPR001005 -
Lal10g0959 988 CDD SANT 617 658 IPR001005 -
Lal10g0959 988 MobiDBLite consensus disorder prediction 1 23 - -
Lal10g0959 988 CDD SANT 565 608 IPR001005 -
Lal10g0959 988 Gene3D - 563 613 - -
Lal10g0959 988 Gene3D - 614 661 - -
Lal10g0959 988 Gene3D - 457 506 - -
Lal10g0959 988 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 609 663 IPR017930 -
Lal10g0959 988 PANTHER SNRNA-ACTIVATING PROTEIN COMPLEX SUBUNIT 4 17 736 - -
Lal10g0959 988 ProSiteProfiles Myb-like domain profile. 609 659 IPR001005 -
Lal10g0959 988 ProSiteProfiles Myb-like domain profile. 454 506 IPR001005 -
Lal10g0959 988 SUPERFAMILY Homeodomain-like 439 506 IPR009057 -
Lal10g0959 988 SUPERFAMILY Homeodomain-like 588 661 IPR009057 -
Lal10g0959 988 MobiDBLite consensus disorder prediction 810 839 - -
Lal10g0959 988 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 515 562 IPR017930 -
Lal10g0959 988 Pfam Myb-like DNA-binding domain 566 625 - -
Lal10g0959 988 Pfam Myb-like DNA-binding domain 462 523 - -
Lal10g0959 988 ProSiteProfiles Myb-like domain profile. 562 608 IPR001005 -
Lal10g0959 988 SMART sant 613 661 IPR001005 -
Lal10g0959 988 SMART sant 458 508 IPR001005 -
Lal10g0959 988 SMART sant 511 560 IPR001005 -
Lal10g0959 988 SMART sant 359 455 IPR001005 -
Lal10g0959 988 SMART sant 562 610 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal10g0959 Lal-Chr10 16900051 16916787 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal10g0959 205 760 MYB-Related Transcription Factor Family AT3G18100 48.596 1.76e-176 528
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Lal10g0959 Myb_DNA-bind_6 5.7e-12 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal10g0959 K09422 - gmx:100818474 940.643
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal10g0959 10 16900051 16916787 Lal10g0959 10 16900051 16916787 ECH