Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal10g0953 ATGGAATCTAAGAGGAATAGTAGTAATGAAAACAACTACCAACAACACAAAGATGAAGATGAAGAAGAAGAAGAAGAATTGGAACAAGAACAAGAACAAGAAAACAGTGACATTCTCAAGAGAAGAATCTCTAGCCACCCTCTCTATGGACTTCTGGTTGAAACTCACTTGGAGTGTTTGAAGGTTGGTGACATTTCCAACTTGGACAGTGAGCTCAAGATCAATCATCAGATGCAAGCAATGAAGAAACAAAACTTGGGAATGTTCAGCCAGTCTGAGCTTGATCTTTTCATGGAAGCATATTGCATGGCACTTAGGCAGCTTAAAGAAGCAATGGAAGAACCACAAAAGAAGTCAATAGCTTTCATAAACAACATGCATTCACAACTTAGGGAGCTCACTATGGCAGCTATGCCTACACCTTCTGAACCAACTGATGCTACTTCTTCTTCTTCTTCTTCTACTAGTGGCTGCAAATTCATAAGAAATCCTACAATTTAG 501 0.3912 MESKRNSSNENNYQQHKDEDEEEEEELEQEQEQENSDILKRRISSHPLYGLLVETHLECLKVGDISNLDSELKINHQMQAMKKQNLGMFSQSELDLFMEAYCMALRQLKEAMEEPQKKSIAFINNMHSQLRELTMAAMPTPSEPTDATSSSSSSTSGCKFIRNPTI 166
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal10g0953 166 MobiDBLite consensus disorder prediction 141 166 - -
Lal10g0953 166 Pfam KNOX2 domain 92 134 IPR005541 GO:0003677|GO:0005634
Lal10g0953 166 Pfam KNOX1 domain 39 63 IPR005540 GO:0003677|GO:0005634
Lal10g0953 166 SMART KNOX1_2 37 77 IPR005540 GO:0003677|GO:0005634
Lal10g0953 166 PANTHER HOMEOBOX PROTEIN TRANSCRIPTION FACTORS 17 141 - -
Lal10g0953 166 MobiDBLite consensus disorder prediction 1 36 - -
Lal10g0953 166 PANTHER FUSED COMPOUND LEAF 1 17 141 - -
Lal10g0953 166 MobiDBLite consensus disorder prediction 1 16 - -
Lal10g0953 166 MobiDBLite consensus disorder prediction 17 32 - -
Lal10g0953 166 Coils Coil 6 42 - -
Lal10g0953 166 MobiDBLite consensus disorder prediction 139 166 - -
Lal10g0953 166 SMART KNOX2_2 84 135 IPR005541 GO:0003677|GO:0005634
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal10g0953 Lal-Chr10 16868246 16871317 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal10g0953 38 151 Homeobox Transcription Factor Family AT1G70510 30.328 1.85e-10 56.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal10g0953 - - aip:107642073 192.2