Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal10g0949 ATGGTATTCAAAGGCAGATTCTTCTCTTCCAAAAAATCCGATTCTTCAAATTCAAGTCCCGATGCTTCTTCCAACAACAACACTCCTAAATCATTCACTTCCAATTCTCCTTCCAGATCTCAATACAACAATTCCAATTCCCCTTCCATTAAACCCTTAGCAGGTGCCTTCGCCGTCGCCAGAGCCACGTCGCGGAGGACGCGGGTTAACGATGTGATAAGGAATAAGGATGTCATCAAAGGAAAGGAAATTCAAAATCAGGTGCCGGAGTCTCGTCCGAAGACGTTAAATTCGGCGGTGGTGGCGGGAGGTAAGGTGCTGTCGCCGTCGTCATCGGCTTCGCCGATTATGGCGTCGTCGTTAGGGTTGAATAAGATAAAGACGAGATCAGCACCGTTGCCGCAGGAGAGTTTTTTCGAGTTTAGCGGTGATGATAAGCTCGTTGCGGATAATCTCACTAGGAATGGTAGCAGTGTTGGTGGGAAGAAGAAGGAGAACAGAGTATGGTTTCAGGAGATTGGAGCTTCGGTTGATAATGGTGATAGAATGTCTATTGGGAGTGCACTTTCCAGGGAACGGAGTCCGGTTGTGTCCGTTCAGTCGCCGCCACAGAACGGGGAATCCAATGCCGAAGCAGGGAGGCAGACGTCATCAATGGCTCAGACTGGAGGCTTAGGAAGTGCAGATGCTAGCACTCCAGAGACAGCATATGATTATGAAAACCCGAAGGAGTCTGAATCTCCTCGTTTTCAAGCTATATTACGTGTCACAAGTGCACCCAGAAAGAGGTTTCCTGTTGACATCAAGAGTTTTTCCCATGAGTTGAATTCAAAAGGTGTCCGGCCTTTTCCTTTTTGGAAGCCTCGGGGGCGAAATAACCTCCAGGAGGTCTTGGTTGTTATTAAGGCAAAATTTGATAAAGCAAAGGACGAGGTGAACACTGATCTAGCTGTTTTTGCAGCAGACCTGGTTGGAATTCTTGAAAAAAATGCAGATACTCATCCTCAGTGGCAAGAGACAATTGAAGACTTGTTAATTTTGGCTAGGAGGTGTGCTATGACCTCATCTGGGGAGTTTTGGCTTCAGTGTGAAGGCATAGTTCAGGAGTTGGATGATAGGCGTCAGGAGCATCCTCCAGGGATGCTAAAGCAGCTTCACACTCGAATGCTTTTCATTCTCACAAGGTGTACCAGATTATTGCAGTTCCACAAGGAAAGTGTTTTGGCTGAGGATGAACATGTTTTCAATCTTCGCCAGTCCAGAGTCTTGCATTCTGTTGAAAAAGGTATTCCTCCTGGTTTGGGAAGGGATGCTAAAAGTTCTAGTTCTGCAAGGGCCTTGAAGACCTCAACAAAAAAAGCATATAGTCAAGAGCAGAGTAGTACCTTGGGATGGAAGAAAGATACCGTGCAACCAAAAAAGCTATCACTTCCTGCTGCTGATGAAACTTCAAATCACTTCAAGTCTCCTTCTGGAAGGGACCGAATGGCTTCTTGGAAGAAATTTCCATCTCTATCAGGAAAAAGCCCAAAAGAAGCGGTACAGTTGAAGGGCCAAAACAATGGGAGGGTTGAACCTTCAAAGACGCCAAATAGTAATAATGAAGAGAGCTCAATAATTTGTCGTATATGTGAGGAGGAAGTACCTACTTCACATCTTGAAGATCATTCAAGGACTTGTGCAGTTGCTGATAGATGTGATCAGAAGGGACTGAGTGTTAATGAGCGTCTTGTCAGAATTGCTGAAACACTAGAAAAGATTATGGAGTTGTGTACACAAAAGGATACCCAACAAATACTGGGAAGTCCCGATGTTGCAAAAGTGTCAAATTCAAGTATGAATGGAGACTGTGATGTTCCTTCCCCTAAACTTAGTGATTGGTCTGGCAGAGCCTCAGAGGATATGCTAGATTGTTTCCCTGAATCCAATAATTCTGTTTTTATGGATGATCTAAAGGGATTACCACTTATATCATGTAACATTCGTTTTGATCCAAAGTCTGACCAAGGTATGACAACATCATCGGGAGGGAGCATGACTCCTAGGTCGCCTTTAATGACACCAAAGTCAAGTCAGTTTGACTTGCTCTTGGCAGGGAAGGGTGCTTATTCTGAACATGATGATCTGCCACAGATGAATGAACTTGCTGATGTAGCACGATGTGTAGCAAGCATACGTCTCGATGATGATCAATCAGCACCATACTTATTAGCCTGTCTTGATGACTTGCGGGTTGTTGTGGAGCGAAGGAAGTATAATTCACTAACGGTGGAGACCTTTGGAACACGAATTGAGAAGCTGATACGGGAGAAGTATTTGCAGCTTACTGAGATGGTGGATGTCGAAAAGATAGATATAGAGAGCACTGTAATTGATGATGATGTTCTCATGGAAGATGATGTGGTTCGTAGCTTGAGAACAAGTCCACTCCATTCTTCGAGGGACCGTACCTCTATTGATGACTTTGAGATTATAAAACCTATCAGTCGTGGAGCATTTGGACGGGTTTTCTTGGCTAAAAAGAGAACAACTGGTGATCTTTTTGCAATAAAGGTTCTGAGGAAGGCAGATATGATCCGTAAGAATGCTGTCGAAAGTATATTGGCAGAACGTGATATTTTAATTACGGTCCGCAATCCTTTTGTGGTTCGGTTCTTCTATTCTTTTACATGTCGTGAGAACTTGTATCTTGTCATGGAGTATCTTAATGGAGGTGATCTGTATTCATTGTTACGAAATTTAGGTTGCCTAGATGAGAAAGTTGCCCACGTATATATTGCCGAAGTGGTGCTTGCATTAGAATATTTGCATTCACTGCGTGTGGTTCATCGTGACTTGAAGCCGGACAATTTATTGATTGCACATGATGGTCACATTAAGCTAACAGACTTTGGGCTTTCAAAAGTTGGTCTCATCAACAGCACGGATGATTTGTCTGGTCCAGCAGTGAGTGGTACATCACTACTTGGGGAGGACGAGCCTCACTTATCTACATCTGAGCATAAAAGAGAACTGCGGAAGAACCGTTCTGCTGTGGGAACACCTGATTATTTGGCACCAGAGATACTTTTGGGAACTGGACATGGGTATACAGCAGATTGGTGGTCTGTTGGAGTCATCTTATTTGAGTTGCTTGTTGGTCTTCCACCCTTCAATGCAGAGCATCCTCAGAGCATATTTGATAATATCCTTAATCGTAAGATACCTTGGCCTGCAGTTCCTGAGGAAATGAGTCCTGAAGCTCAAGATCTTATTGATCGATTATTGACAGAAGATCCTGATCAAAGACTGGGAGCCAGAGGGGCATCTGAGGTGAAGCAACATGTTTTCTTCAAGGATATTAACTGGGACACACTTGCCAGGCAGAAGGCTGCATTTGTTCCTGATTCTGAGAGTGCTCTAGACACCAGTTACTTCACTTCTCGCTACTCATGGAATACTTCTGATGGTGTTGTATATCCAGCAAGTGATGCCGAGGATTCTAGTGATACTGATAGCTCAAATGGCAGCAGTGGTTGCTTGAGCAATCGCCTAGATGAAGTGGGAGATGAATGTGGGGGTCTTTCCGGGTTTGATTCTGGTTCATCTGTCAATTACTCTTTCAGTAATTTTTCCTTTAAGAATCTCCCCCAGCTTGCATTAATCAACTATGATCTTATTAGCAAGGGTTGCAAAGATGATCCGTCAACAAATTATAGTACATAG 3705 0.4383 MVFKGRFFSSKKSDSSNSSPDASSNNNTPKSFTSNSPSRSQYNNSNSPSIKPLAGAFAVARATSRRTRVNDVIRNKDVIKGKEIQNQVPESRPKTLNSAVVAGGKVLSPSSSASPIMASSLGLNKIKTRSAPLPQESFFEFSGDDKLVADNLTRNGSSVGGKKKENRVWFQEIGASVDNGDRMSIGSALSRERSPVVSVQSPPQNGESNAEAGRQTSSMAQTGGLGSADASTPETAYDYENPKESESPRFQAILRVTSAPRKRFPVDIKSFSHELNSKGVRPFPFWKPRGRNNLQEVLVVIKAKFDKAKDEVNTDLAVFAADLVGILEKNADTHPQWQETIEDLLILARRCAMTSSGEFWLQCEGIVQELDDRRQEHPPGMLKQLHTRMLFILTRCTRLLQFHKESVLAEDEHVFNLRQSRVLHSVEKGIPPGLGRDAKSSSSARALKTSTKKAYSQEQSSTLGWKKDTVQPKKLSLPAADETSNHFKSPSGRDRMASWKKFPSLSGKSPKEAVQLKGQNNGRVEPSKTPNSNNEESSIICRICEEEVPTSHLEDHSRTCAVADRCDQKGLSVNERLVRIAETLEKIMELCTQKDTQQILGSPDVAKVSNSSMNGDCDVPSPKLSDWSGRASEDMLDCFPESNNSVFMDDLKGLPLISCNIRFDPKSDQGMTTSSGGSMTPRSPLMTPKSSQFDLLLAGKGAYSEHDDLPQMNELADVARCVASIRLDDDQSAPYLLACLDDLRVVVERRKYNSLTVETFGTRIEKLIREKYLQLTEMVDVEKIDIESTVIDDDVLMEDDVVRSLRTSPLHSSRDRTSIDDFEIIKPISRGAFGRVFLAKKRTTGDLFAIKVLRKADMIRKNAVESILAERDILITVRNPFVVRFFYSFTCRENLYLVMEYLNGGDLYSLLRNLGCLDEKVAHVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDFGLSKVGLINSTDDLSGPAVSGTSLLGEDEPHLSTSEHKRELRKNRSAVGTPDYLAPEILLGTGHGYTADWWSVGVILFELLVGLPPFNAEHPQSIFDNILNRKIPWPAVPEEMSPEAQDLIDRLLTEDPDQRLGARGASEVKQHVFFKDINWDTLARQKAAFVPDSESALDTSYFTSRYSWNTSDGVVYPASDAEDSSDTDSSNGSSGCLSNRLDEVGDECGGLSGFDSGSSVNYSFSNFSFKNLPQLALINYDLISKGCKDDPSTNYST 1234
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal10g0949 1234 MobiDBLite consensus disorder prediction 9 51 - -
Lal10g0949 1234 ProSiteProfiles AGC-kinase C-terminal domain profile. 1112 1216 IPR000961 GO:0004674|GO:0005524|GO:0006468
Lal10g0949 1234 Coils Coil 291 311 - -
Lal10g0949 1234 MobiDBLite consensus disorder prediction 1159 1173 - -
Lal10g0949 1234 SUPERFAMILY Protein kinase-like (PK-like) 819 1147 IPR011009 -
Lal10g0949 1234 ProSiteProfiles Protein kinase domain profile. 822 1111 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal10g0949 1234 MobiDBLite consensus disorder prediction 191 229 - -
Lal10g0949 1234 CDD STKc_MAST_like 828 1116 - -
Lal10g0949 1234 ProSitePatterns Serine/Threonine protein kinases active-site signature. 941 953 IPR008271 GO:0004672|GO:0006468
Lal10g0949 1234 Gene3D Transferase(Phosphotransferase) domain 1 906 1129 - -
Lal10g0949 1234 Gene3D Phosphorylase Kinase; domain 1 820 1140 - -
Lal10g0949 1234 MobiDBLite consensus disorder prediction 1 51 - -
Lal10g0949 1234 MobiDBLite consensus disorder prediction 513 535 - -
Lal10g0949 1234 PANTHER SERINE/THREONINE-PROTEIN KINASE 528 1231 - -
Lal10g0949 1234 PANTHER SERINE/THREONINE-PROTEIN KINASE 75 448 - -
Lal10g0949 1234 MobiDBLite consensus disorder prediction 442 467 - -
Lal10g0949 1234 MobiDBLite consensus disorder prediction 188 250 - -
Lal10g0949 1234 Pfam Protein kinase domain 822 1111 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal10g0949 1234 MobiDBLite consensus disorder prediction 994 1008 - -
Lal10g0949 1234 MobiDBLite consensus disorder prediction 427 535 - -
Lal10g0949 1234 MobiDBLite consensus disorder prediction 1154 1173 - -
Lal10g0949 1234 PANTHER SERINE/THREONINE PROTEIN KINASE IREH1-RELATED 75 448 - -
Lal10g0949 1234 PANTHER SERINE/THREONINE PROTEIN KINASE IREH1-RELATED 528 1231 - -
Lal10g0949 1234 SMART serkin_6 822 1111 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal10g0949 1234 MobiDBLite consensus disorder prediction 983 1008 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal10g0949 Lal-Chr10 16816617 16828655 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal10g0949 113 1228 AGC Kinase Gene Family AT3G17850 65.089 0.0 1493
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_MAST Lal10g0949 Pkinase 8.8e-65 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal10g0949 - - gmx:100816852 1825.83