Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal10g0937 ATGGATGGGGATAATGGTCTTAACATACGTAATTGGGGTTACTATGAACCTGCCACATCATTTAAGAGCCATTTGGGACTTCAGCTAATGTCATCAATGCCAGAGAAACCTCTGCTTGGAACGCGCAATGCTGTGGTTTTATCCGGTAATCATGGGGGATTTCACCATAGGGACATCGGGATGTCCCATGCTGCGTACCCAATGGATTACATGAGGGATGCTTGGATTAGTAGTCAGAGAGAGAAGTATATGAATATGATACCGACCAACCTGACTTATGGTGGTATTCCAGAGACATCTTCAGCACATCATATGCAAATGATTCAACCACCGAAGGATCCGAAGGAAGAAAGAGCTATTGAAGAAGAGCCGGTTGTTGAGAAGGTGAGCGGCACTAGTAAGAAAAGGCAAAGCAAGGTTCCCAAATCTCCCAAGGCAAAGAAGCCCAAGAGGGGGCCTCGTGTGCCTAAGGATGACGGTGCTCCTTCAGTTCAACGGGCAAGGGTTCCGAAGAAATCTGTTGAAATTGTAATAAACGGGATCGATATGGATATTTCCAGTATTCCAATTCCCGTTTGTTCATGCACTGGTACACCTCAACAGTGTTATAGATGGGGCTCTGGTGGGTGGCAGTCTGCATGTTGCACAACAGGCATGTCAATGTATCCTTTGCCTATGAGTACCAAGCGGCGTGGAGCTAGGATTGCTGGTAGAAAAATGAGTATAGGAGCATTTAAGAAAGTTCTAGAGAAGCTTGCGGCGGAGGGTTATAACTTTTCTAATCCAATTGATTTGAGGACTTATTGGGCAAAACATGGCACCAATAAGTTTGTCACTATCAGTTCTGTTAACTTCTTTGGATTCAGTACATCGGAATTCAATCTTTTGGTCCTGATAGTGGACTAG 906 0.447 MDGDNGLNIRNWGYYEPATSFKSHLGLQLMSSMPEKPLLGTRNAVVLSGNHGGFHHRDIGMSHAAYPMDYMRDAWISSQREKYMNMIPTNLTYGGIPETSSAHHMQMIQPPKDPKEERAIEEEPVVEKVSGTSKKRQSKVPKSPKAKKPKRGPRVPKDDGAPSVQRARVPKKSVEIVINGIDMDISSIPIPVCSCTGTPQQCYRWGSGGWQSACCTTGMSMYPLPMSTKRRGARIAGRKMSIGAFKKVLEKLAAEGYNFSNPIDLRTYWAKHGTNKFVTISSVNFFGFSTSEFNLLVLIVD 301
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal10g0937 301 PANTHER PROTEIN BASIC PENTACYSTEINE2-LIKE 1 280 - -
Lal10g0937 301 MobiDBLite consensus disorder prediction 95 168 - -
Lal10g0937 301 MobiDBLite consensus disorder prediction 109 134 - -
Lal10g0937 301 PANTHER - 1 280 IPR010409 -
Lal10g0937 301 Pfam GAGA binding protein-like family 1 280 IPR010409 -
Lal10g0937 301 SMART GAGA_bind_2 1 281 IPR010409 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal10g0937 Lal-Chr10 16756466 16757543 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal10g0937 1 280 BBR or BPC Transcription factor family AT2G01930 49.832 4.63e-91 270
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF BBR-BPC Lal10g0937 GAGA_bind 2.6e-110 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal10g0937 - - gmx:606296 474.552
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal10g0937 10 16756466 16757543 Lal10g0937 10 16756466 16757543 ECH