Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal10g0932 ATGAGTGCTTCTACTAGAAAGAAGGTTCAGAGAAAGAGCAAGATCAGAGGTTACAATCTCAAAGTTGATGCTCTCGATGAGATCCTTTCCTTCGTTTCTCGTTTCCCTAATTCGGATCAAGACGAAGCTATTGATCTTCTCCTCGATCAAATCGATCACGAATCTCTGAAATCTACTATAGTGGACAAGGAGCTAGTACAACGTCTAGTTAATCTGTTATGGGAAACCGATGAGGCGGTTGGCGAAACCTCCGTTTCCTTCGGTTCTAGTTCTCGTTCCTCCATTTGCGTCATTGATGCCTTTGACATCCCGAGATTTCATTACGACCCTATCAGAAAGCAATTCTATGAGCACACAGGCAGATTACCTGTTCACGGGGAAGCATCAGCAAAAGAAGCTCTGTACAGGGATAGGTTTCTTTTGTTATCCCAGAGGCTCTCTCGTGACCAGCATTTTTCAAAGCCTGCTTTTGATTCTGAATTTTCACATTTTGGGAGTTGTGAGCAATACAAGATAACTACAGGATTCTTTTCAGAGAACACCATAGTTGTTGCCGAAGGCAAGATGCTTGTGGAGGGTATTTTTCAGGTTTTAACATGTGGATTTCCCCCATTGGAGGATAGAGATAAGTCACTTAAACAACTTTCAGGGCAGGACTTTTTTGGTGGTGGTACTTTCACGAGAGAGGAAACTATTAAACTGGAAGAGATGGAAAGAAGAGCAGTGAATGACATGTTCGTTATTCTATCTGATATTTGGGTAGACAATGAAGAAGCTTTGGGAAAGCTAGAGACTGTTTTGGATGGCTTTGAGAGTGTGGAAGTGGTTCCTTCCTTATTTGTTTTCATGGGAAATTTCTCTTCTCACCCATGTAACCTTTCTTTTCATACTTATTCGACCCTTAGGTTGCAGTTTGGCAAGCTGGGGCAAATTATTGCTGCCCATTCACGGCTAAAAGAGCACAGTCGATTTCTGTTTATTCCAGGTCCTGATGATGCAGGTCCTTCAACATCTCTTCCTAGGTGTGCTCTACCAAAATATTTAACTGAGGAGCTCCAAAAGCATATTCCGAATGCCATATTTTCAAGTAATCCCTGCAGGGTCAAGTTTTATAGCCAAGAAGTTGTATTTTTCCGAGAAGATATGCTTTATAGAATGCGCCGTTCTTGTTTAATGCCACCTTCTGAGGAAGAAACCGATGATCCTTTTCAGCATCTTGTTGCTACAATAACCCATCAGAGTCATCTCTGTCCACTACCTCTAACTGTGCAACCCATCATCTGGACTTATGATCACTCCCTCTATCTTTATCCAACTCCACACACGATAGTGTTGGGAGATAGTAGTCAACAGAAGGCATTCAAGTACACAGGAATCACTTGTTTCAATACTGGTTCCTTCTCAATTGACAGCACATTTGTGGTGTACCGTCCTTGCTCTCAGGAAGTTGAATTGTCAGCTTTGTAA 1467 0.4206 MSASTRKKVQRKSKIRGYNLKVDALDEILSFVSRFPNSDQDEAIDLLLDQIDHESLKSTIVDKELVQRLVNLLWETDEAVGETSVSFGSSSRSSICVIDAFDIPRFHYDPIRKQFYEHTGRLPVHGEASAKEALYRDRFLLLSQRLSRDQHFSKPAFDSEFSHFGSCEQYKITTGFFSENTIVVAEGKMLVEGIFQVLTCGFPPLEDRDKSLKQLSGQDFFGGGTFTREETIKLEEMERRAVNDMFVILSDIWVDNEEALGKLETVLDGFESVEVVPSLFVFMGNFSSHPCNLSFHTYSTLRLQFGKLGQIIAAHSRLKEHSRFLFIPGPDDAGPSTSLPRCALPKYLTEELQKHIPNAIFSSNPCRVKFYSQEVVFFREDMLYRMRRSCLMPPSEEETDDPFQHLVATITHQSHLCPLPLTVQPIIWTYDHSLYLYPTPHTIVLGDSSQQKAFKYTGITCFNTGSFSIDSTFVVYRPCSQEVELSAL 488
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal10g0932 488 Pfam DNA polymerase alpha/epsilon subunit B 246 451 IPR007185 GO:0003677|GO:0006260
Lal10g0932 488 Gene3D - 2 72 - -
Lal10g0932 488 PANTHER DNA POLYMERASE EPSILON SUBUNIT B 6 172 IPR016266 GO:0003677|GO:0006261|GO:0008622
Lal10g0932 488 PANTHER DNA POLYMERASE EPSILON SUBUNIT B 170 487 IPR016266 GO:0003677|GO:0006261|GO:0008622
Lal10g0932 488 PIRSF DNA_pol_epsilon_2 166 488 IPR016266 GO:0003677|GO:0006261|GO:0008622
Lal10g0932 488 PIRSF DNA_pol_epsilon_2 1 172 IPR016266 GO:0003677|GO:0006261|GO:0008622
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal10g0932 16 457 Core DNA Replication Machinery Family AT5G22110 62.603 0.0 611
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal10g0932 K02325 - zju:107419650 766.148