Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal10g0926 ATGGCTGCTATTGCTAACGTTGTTGGTGTTAATGTTGTTGTATCTGCTCAACCCATAACAAATAATTTCAGTTTCAACCATAATAACATCCAAAGTCAGAGACTTTATCTGAATTGTTCCAAACCCAACCAGATAATAAGCTCATTCCCTTTGTCCTTATCATCACCACTCACAAAAAAGGGTACTTGCTTTGTATTGCCATGTCTCCCTTCTGATTCTGAATCCTTCAACTCATCTTCCATTACAAGGAAAGTTTATGATGTTCCTTCACTTAGGCTCTTTGTTAGTGGGCTATCTTTTCGTACCACCGAAGAGAGCTTGCGAAAAGCATTTGAGAATTTTGGTCAACTTGTAGAAGTGAATCTGGTAATGGATAAAATTGCAAATAGACCAAGAGGATTTGCTTTTCTTCGTTATGCTACTGAAGATGAATCTCATAAGGCTATTGAGGGAATGCATGGAAAGTTCTTGGATGGTAGAGTCATATTTGTGGAAGTAGCCAAACCAAGATCAGAGCTACGGCAAGAAAAGACTAGTGCAAAATTCTAG 549 0.3825 MAAIANVVGVNVVVSAQPITNNFSFNHNNIQSQRLYLNCSKPNQIISSFPLSLSSPLTKKGTCFVLPCLPSDSESFNSSSITRKVYDVPSLRLFVSGLSFRTTEESLRKAFENFGQLVEVNLVMDKIANRPRGFAFLRYATEDESHKAIEGMHGKFLDGRVIFVEVAKPRSELRQEKTSAKF 182
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal10g0926 182 SUPERFAMILY RNA-binding domain, RBD 82 175 IPR035979 GO:0003676
Lal10g0926 182 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 91 169 IPR000504 GO:0003723
Lal10g0926 182 PANTHER TRANSFORMER-2-RELATED 12 178 - -
Lal10g0926 182 Gene3D - 70 181 IPR012677 -
Lal10g0926 182 PANTHER RNA-BINDING PROTEIN 1 12 178 - -
Lal10g0926 182 SMART rrm1_1 92 165 IPR000504 GO:0003723
Lal10g0926 182 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 93 162 IPR000504 GO:0003723
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal10g0926 Lal-Chr10 16649522 16652716 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal10g0926 87 150 C2H2 Transcription Factor Family AT2G19380 34.375 1.49e-09 54.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal10g0926 - K13195 lang:109343093 311.227
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal10g0926 10 16649522 16652716 Lal10g0926 10 16649522 16652716 ECH