Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal10g0925 ATGTCACCAGTAGGATTACCACCTGGTTTTAGGTTTCATCCAACTGATGAAGAGCTTGTGAATTATTATCTCAAGAGGAAGATCAATGGCCTTGAAATTGAACTTGATATCATTCCTGAGGTTGATCTCTACAAATGTGAACCATGGGAATTGGCAGAGAAATCATTTTTACCAAGTAGAGACCCAGAGTGGTACTTCTTTGGACCCAGGGACAGGAAATACCCCAATGGATTCAGAACAAATAGAGCAACTAGAGCTGGATACTGGAAATCAACAGGGAAAGATAGGAAAGTGTCATGCCAAAACAGACCTATTGGTATGAAGAAGACATTGGTGTACTATAGAGGTAGAGCTCCTCAAGGTATGAGAACTGATTGGGTTATGCATGAGTATCGCCTTGATGACAAGGAGTGTGAAGATACCTCTGGCTTACAGGATACATATGCATTGTGCCGAGTGTTCAAGAAAAATGGAATTTGCTCTGAAATTGAAGAACAAGGGCAATGTAGTATGTCACCACTAATTGAGAGCTCTCAAACCATAATTAATGAGTGTGAGACCATGTCTCCAGACATACTAGGAACATCATATTCATGCTTGGAAGAGGAAGACAAAGATGATTCATGGATGCAGTTCATTACAGAAGATGCATGGTATTCTTCTAATGCAGCAATGGTTGGTGGTGGTGAAGAAGTTTCACATGTTAATTTTACTAACTAA 720 0.4 MSPVGLPPGFRFHPTDEELVNYYLKRKINGLEIELDIIPEVDLYKCEPWELAEKSFLPSRDPEWYFFGPRDRKYPNGFRTNRATRAGYWKSTGKDRKVSCQNRPIGMKKTLVYYRGRAPQGMRTDWVMHEYRLDDKECEDTSGLQDTYALCRVFKKNGICSEIEEQGQCSMSPLIESSQTIINECETMSPDILGTSYSCLEEEDKDDSWMQFITEDAWYSSNAAMVGGGEEVSHVNFTN 239
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal10g0925 239 ProSiteProfiles NAC domain profile. 6 156 IPR003441 GO:0003677|GO:0006355
Lal10g0925 239 Pfam No apical meristem (NAM) protein 7 133 IPR003441 GO:0003677|GO:0006355
Lal10g0925 239 PANTHER NAC DOMAIN-CONTAINING PROTEIN 86-LIKE 1 239 - -
Lal10g0925 239 Gene3D NAC domain 15 159 IPR036093 GO:0003677|GO:0006355
Lal10g0925 239 SUPERFAMILY NAC domain 4 157 IPR036093 GO:0003677|GO:0006355
Lal10g0925 239 PANTHER NAC DOMAIN-CONTAINING PROTEIN 82-RELATED 1 239 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal10g0925 Lal-Chr10 16643443 16647865 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal10g0925 1 232 NAC Transcription Factor Family AT3G17730 74.390 1.87e-131 369
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Lal10g0925 NAM 2.2e-39 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal10g0925 - - gmx:100784495 471.855
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal10g0925 10 16643443 16647865 Lal10g0925 10 16643443 16647865 ECH
Lal8g0495 8 3378448 3382200 Lal10g0925 10 16643443 16647865 LSH