Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal10g0923 ATGGTGAGGAAGAGGAGAACCGAAGCACCTACTGGAGGTGAAAGCTCCGAGCCTCATCAGCGTCCTGCTGAAAGGAATGCCCCACCCCCTCAACAATACGCTCCTCTGGCTGGAGGAGCAGGTGGACCACAAGGAGGACGTGGGGGTTATGCATCTCAAGGAGGTCGTGGAGGTGGTTATGGTGGTAACGGGCGTGGTCGTGGAATACCCCAACAACAATATGGTGGCCCCCCTGACTATCAACAAGGTAGAGGAAGGGGAGGGCCTTCTCAGCAAGGAGGTCGTGGTCGTGGTCGTGGTCATGGTGGTGAATATGGTGGCGGCGGCCGTGGTGGTGGTATGGGAAGTGGCCATGGCACAGGGCCTGGACCTTCATATGGTGGCCCATACAGGCCACCTTACCCTGAGCTGCACCAAGCAACCCCAGTGCCATACCAAGCTGGGGTGACTCCTCAGCCTACACCAGATGAGGCCGGACCTTCTTCGCAGGCACCTGAACAGTTACCAGTGGAACAGCAACTGGAGCAGTTGTCCATTCAATCAGAAGCGTCTGATGTTCCCGCTCCAGTCCCTGTTGGTCCACCTGCCAGCAAATCGTCTATTAGGTTTCCCCTTCGTCCTGGAAAGGGTACCTTTGGCCATAAATGTATTGTCAAGGCCAATCACTTCTTTGCCGAGCTGCCTAATAAAGATTTGCATCAATATGATGTCACAATTACTCCAGAAATAATTTCAAAAGGTGTGAATCGAGCTGTAATGGAGCAACTAGTGAAGCTGTATCGTGAATCTCATCTAGGAAAGAGACTCCCTGCTTATGATGGCCAGAAGAGCCTGTATACTGCTGGTCCACTTCCTTTTGTGTCAAAGGAGTTTAGAGTCTCTCTTATTGATGAAGATGACGGAACAGGAGCACAGAGGAGAGAAAGGGAGTTCAAAGTTGTGATAAAAATGGCTGCTCGGGCAGACCTTCATCATTTAGGACTCTTTCTGCAAGGGAGACAAACTGATGCCCCTCAGGAAGCTCTGCAAGTCCTTGACATTGTCCTGCGTGAACTGCCGACTACCAGGTATTGTCCTGTAGGAAGATCATTTTATTCCCCTGATCTTGGTAGAAGGCAGTCATTAGGTGAGGGTTTGGAAAGTTGGCGTGGTTTCTATCAAAGTATCCGCCCCACTCAGATGGGACTGTCTCTGAACATTGATATGTCCTCCACTGCATTTATTGAGCCATTGCCAGTAATTGACTTCGTAACTCAACTGCTGAACAGGGATGCCATTCAGCGACCACTGTCTGACTCTGATCGTGTGAAGATAAAAAAAGCACTCAGGGGTATAAAAGTTGAAGTAACACATCGTGGAAACATTAGAAGAAAATACCGTATCTCTGGCCTTACCTCACAGGCTACAAGAGAGTTGACATTCCCTGTGGATGAGAGGGGAACATTGAAGTCTGTTGTGGAGTATTTCTTTGAGACTTACGGTTTTATCATAAAACATACTCAGTGGCCTTGTTTGCAAGTAGGCAATACACAGAGACCAAACTATTTGCCAATGGAGGTTTGCAAGATTGTAGAAGCTCAAAGGTACTCAAAGAGGTTGAATGAGAGGCAGATTACTGCTTTGCTCAAAGTCACATGCCAGCGTCCTGTTGAGAGAGAGTGTGATATTATGCGGACTGTATATCACAATGCCTACCATGAGGACCCATATGCCAAAGAGTTTGGAATTAAAATTAGTGAAAAACTTGCTCAGGTTGAAGCCCGCATTCTCCCTCCTCCTTGGCTCAAATATCATGATACAGGTAGAGAAAAAGATTGCTTGCCTCAGTTTGGCCTATGGAATATGATGAATAAGAAAATGGTCAATGGGGGAACTGTCAATCACTGGTTCTGCATAAATTTTGCAAGGAATGTTCAAGATAGTGTTGCCCGGGGCTTTTGTTTTGAACTTGCCCAGATGTGTCAAATATCTGGCATGGCATTCAATCTAGATCCAGTAGTTCCCGTACTCAGTGCTCGCCCCGACCAAGTGGAGAAGGTTCTGAAAAATAGGCATTCTGATGCTAAGAGCAGACTGCAGGGACAGGATCTTGATCTGCTCATTGTTATTCTTCCTGATAATAATGGCTCTCTTTATGGTATTGATACGTCGACTAGTCTTATGTCCTTTCTCTCCGTCATGGTGCAGAATGAAAATATCTCAGAACACGGTTTGATTTGTTATGCAGGTGACCTCAAACGTATATGTGAGACAGATCTTGGGGTTGTTTCCCAATGTTGTTTAACAAAGCACATATTTAAAATCAACAAGCCGTACCTTGCAAATGTAGCTTTGAAAATTAATGTAAAGGTTGGAGGAAGGAACACCGTGCTTGTTGATGCGCTTTCACGCCGCATTCCCTTGGTTAGTGACAGGCCTACAATTATTTTTGGAGCTGATGTGACTCATCCACATCCTGGAGAGGATGTCAGTCCTTCTATTGCAGCTGTTGTTGCTTCTCAAGATTGGCCTGAAATTACCAAGTATGCTGGTTTGGTTTGTGCCCAAACTCATAGGCAAGAGCTTATCCAGGACCTGTATAAGCAGTGGCAAGATCCTGTCAGAGGGACTGTGACTGGAGGAATGGTCAAGGAACTTCTGATATCTTTCCGGAAGGCTACGGGGCAGAAGCCAACACGAATCATATTTTACAGGGATGGTGTTAGTGATGGCCAGTTTTATCAAGTTTTATTGTTTGAGCTTGATGCTATTCGGAAGGCTTGTGCATCCCTTGAGCCTAACTATCAGCCACCTGTGACGTTTGTGGTGGTTCAGAAGCGCCATCATACAAGGCTCTTTGCAAGCAACCATAATGACAGGGGTTCTATAGATAGGAGTGGGAATATATTACCTGGAACCGTGGTAGACTCCAAAATTTGTCATCCCACGGAATTTGACTTTTATCTCTGCAGTCATGCCGGAATACAAGGTACCAGCCGGCCTGCTCATTACCATGTTCTGTGGGACGAGAACAATTTTTCTGCGGATGCTTTGCAGACTCTGACCAACAATCTGTGCTACACTTATGCAAGGTGTACACGATCTGTTTCAATTGTGCCTCCTGCCTACTATGCTCATCTTGCTGCATTTCGAGCTCGGTTCTACATGGAACCTGAGACTTCCGACAGTGGGTCGATGGCAAGCGCCGCTTATGCTGCAAGTCGTGGAGTGGCTGGGAGTGCGACTCATAGCACTCGGGCACCTGGTCTCAATGCTGCTGTGAGGCCTCTTCCTGCAGTGAGGGATAATGTGAAGAAGGTTATGTTTTACTGCTAA 3315 0.47 MVRKRRTEAPTGGESSEPHQRPAERNAPPPQQYAPLAGGAGGPQGGRGGYASQGGRGGGYGGNGRGRGIPQQQYGGPPDYQQGRGRGGPSQQGGRGRGRGHGGEYGGGGRGGGMGSGHGTGPGPSYGGPYRPPYPELHQATPVPYQAGVTPQPTPDEAGPSSQAPEQLPVEQQLEQLSIQSEASDVPAPVPVGPPASKSSIRFPLRPGKGTFGHKCIVKANHFFAELPNKDLHQYDVTITPEIISKGVNRAVMEQLVKLYRESHLGKRLPAYDGQKSLYTAGPLPFVSKEFRVSLIDEDDGTGAQRREREFKVVIKMAARADLHHLGLFLQGRQTDAPQEALQVLDIVLRELPTTRYCPVGRSFYSPDLGRRQSLGEGLESWRGFYQSIRPTQMGLSLNIDMSSTAFIEPLPVIDFVTQLLNRDAIQRPLSDSDRVKIKKALRGIKVEVTHRGNIRRKYRISGLTSQATRELTFPVDERGTLKSVVEYFFETYGFIIKHTQWPCLQVGNTQRPNYLPMEVCKIVEAQRYSKRLNERQITALLKVTCQRPVERECDIMRTVYHNAYHEDPYAKEFGIKISEKLAQVEARILPPPWLKYHDTGREKDCLPQFGLWNMMNKKMVNGGTVNHWFCINFARNVQDSVARGFCFELAQMCQISGMAFNLDPVVPVLSARPDQVEKVLKNRHSDAKSRLQGQDLDLLIVILPDNNGSLYGIDTSTSLMSFLSVMVQNENISEHGLICYAGDLKRICETDLGVVSQCCLTKHIFKINKPYLANVALKINVKVGGRNTVLVDALSRRIPLVSDRPTIIFGADVTHPHPGEDVSPSIAAVVASQDWPEITKYAGLVCAQTHRQELIQDLYKQWQDPVRGTVTGGMVKELLISFRKATGQKPTRIIFYRDGVSDGQFYQVLLFELDAIRKACASLEPNYQPPVTFVVVQKRHHTRLFASNHNDRGSIDRSGNILPGTVVDSKICHPTEFDFYLCSHAGIQGTSRPAHYHVLWDENNFSADALQTLTNNLCYTYARCTRSVSIVPPAYYAHLAAFRARFYMEPETSDSGSMASAAYAASRGVAGSATHSTRAPGLNAAVRPLPAVRDNVKKVMFYC 1104
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal10g0923 1104 MobiDBLite consensus disorder prediction 1 168 - -
Lal10g0923 1104 Pfam Argonaute linker 2 domain 551 597 IPR032472 -
Lal10g0923 1104 SMART PAZ_2_a_3 415 547 IPR003100 GO:0005515
Lal10g0923 1104 PANTHER PROTEIN ARGONAUTE 1A 742 1103 - -
Lal10g0923 1104 PANTHER PROTEIN ARGONAUTE 1A 100 713 - -
Lal10g0923 1104 SUPERFAMILY PAZ domain 217 549 IPR036085 GO:0005515
Lal10g0923 1104 Pfam Argonaute linker 1 domain 359 409 IPR014811 -
Lal10g0923 1104 SUPERFAMILY Ribonuclease H-like 688 1050 IPR012337 -
Lal10g0923 1104 CDD PAZ_argonaute_like 410 524 - -
Lal10g0923 1104 Pfam Mid domain of argonaute 608 683 IPR032473 -
Lal10g0923 1104 SMART DUF1785_2 358 410 IPR014811 -
Lal10g0923 1104 Pfam PAZ domain 415 540 IPR003100 GO:0005515
Lal10g0923 1104 SMART Piwi_a_2 724 1050 IPR003165 GO:0003676
Lal10g0923 1104 Gene3D paz domain 404 529 - -
Lal10g0923 1104 ProSiteProfiles PAZ domain profile. 411 525 IPR003100 GO:0005515
Lal10g0923 1104 MobiDBLite consensus disorder prediction 183 204 - -
Lal10g0923 1104 CDD Piwi_ago-like 569 1049 IPR045246 -
Lal10g0923 1104 Gene3D - 798 1104 IPR036397 GO:0003676
Lal10g0923 1104 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 2C 100 713 - -
Lal10g0923 1104 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 2C 742 1103 - -
Lal10g0923 1104 Pfam Piwi domain 743 1049 IPR003165 GO:0003676
Lal10g0923 1104 Pfam N-terminal domain of argonaute 215 349 IPR032474 -
Lal10g0923 1104 Gene3D - 589 792 - -
Lal10g0923 1104 Pfam Glycine-rich region of argonaut 75 184 IPR024357 -
Lal10g0923 1104 ProSiteProfiles Piwi domain profile. 699 1050 IPR003165 GO:0003676
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal10g0923 Lal-Chr10 16606714 16613879 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal10g0923 131 1104 Eukaryotic Initiation Factors Gene Family AT1G48410 76.687 0.0 1543
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal10g0923 K11593 - gmx:100780375 1641.71
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal8g0497 8 3394557 3402345 Lal10g0923 10 16606714 16613879 LSH
Lal25g0509 25 3606750 3614737 Lal10g0923 10 16606714 16613879 LSH