Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal10g0918 ATGATGTTTTTTTCTTCATCATTTTCCTTCATGCACTCTTCAACTGATTTTCTCCTTAAACCCATTGTTCTTCATGGTTTATCTGCTTCCTTCCATCTACTGTCACTAAGTGTAGTTTTAGTGTCATGGGTTTGGAACAAGTTCACAGTGGGAACAAGACATGAATACCAAGAAAAATCAAATGACACTCTTTTGAAAAAGCCATTTTTTTGTTCTCTGGGTGCTTCTGCTTTCAATATTTTGCTCTGTCTCTTTAACTTCTTTTGGTATAGAAGTGGTTGGACAGAAGAAAAGGCTGTGACCCTTTTTGATTTAGCACTCAAAACAGTTGCTTGGGGTGTTGTTTGTGTTTGCTTGCATAAACAATATTTCTTCTTATGTTCTGGTGGAAGAAGGTTCTCATCATTCTTCAAAACATGGTGTGTTCTCTATTTCTTTATTTCATGTTATTGTCTTGTAGTGGACATTGTTTTTCTCTATGGAAAACATGTTGTGCTACCATTTCAGTACTTGGTTTCTGATGCTGTATCAACCTGTGTGGGGTTGTTCTTCTGTTATGTTGGCTACTTTGTAAACAATGATAATGAAGGTAGTAGTATTCTTCAAGAACCTCTTTTGAATGGTGATACATATGTTAGAAATGGCTTAGGGTCAAAAGAGACCAAAGGGGATGACACTGTTACCCCTTTCTCAAATGCTTCAATTTTCAGCATTCTTACATTCTCTTGGGTAGGTCCTCTTATTGCTCTTGGAAATAAGAAGACCATAGACCTTAAAGATGTTCCTCAACTTGACAGCAGAAATAGTATAGTTGGAGCTTTTCCAAAATTTAGAGATGATCTAGAAGCAGATTGTGGTGCAGTTAACAATGTCACCTCACTTAAGCTGGCTAAGTCATTAGTACTCTCAGCATGGAAATATATTCTTTTCACAGGTTTTCTTGCATTGTTGAACACATTAGCGTCTTATGTTGGTCCTTATCTTATTGATTCTTTTGTGCAATACCTTAATGGAAGAAGGCTATATGAAAACCAAGGTTATATGTTGGTTTCAGCATTCTTTTTTGCAAAGCTTATAGAGTGCCTGACCCAAAGGCATCAGGTCTTTTGGCTGCAGCAAGTTGGAATTCGAATCCGAGCACTAATCGTCACAATGGTTTATAATAAAGCATTGAACCTTTCTTGCCAATCAAGGAAGGACCACACTTCTGGTGAAATAATCAATTTCATGTCTGTGGATGCTGAAACAATTGGTGGATTTGCTTGGTCCATCCATAATTTGTGGTTGGTACCTCTGCAAGTTATGCTGGCCTTGTTGATTTTGTATAAAAACCTTGGACTTGCTTCAATTGCTGCTTTTGTTGCAACTGTCCTTATAATGTTATTAAACTTTCCCTTGGGGTCATTTCAAAAGAAGTTTCAGAGTAAGATGATGGAGGCAAAAGATACAAGAATGAAGGCAACATCCGAGGTGTTAAGGAACATGAGGATCCTCAAACTACAGGGTTGGGAAATGAAGTTTCTATCGAAGATAACCGAGTTCAGGAAAACTGAGCAAGGCTGGTTAAAGAAATATCTTTTTACTTCATCCATCAGTGCATTTGTGTTTTGGTGTACCCCTATGTTTGTCTCCGCGGTTTCTTTTGGAACTTGTATTCTTATAGGGATCCCTCTTGAATCAGGGAAGATTTTGTCTGCACTTGCAACTTTCAGGATTCTTCAGGAGTCCATTTATGGTATTCCGGATACTATTTCAGAAGTTGCTCAAACTAAGGTTTCTCTTTATAGGATTTCATCATTCCTTCGTCTACAGGACCAGCAGTTGGATGTTGTAGAGAGGCTTCCACGGGGTAGTTCTAATACCGCAATTGAAATAGTTGATGGGAATTTCTCTTGGGATTTATCCTCCCCTAATACAGCCTTGAAAAACATAAATCTCAAAGTTTCTAGTGGCATGAATGTTGCTGTTTGTGGCACTGTTGGATCAGGCAAGTCTACTTTACTTTCTTGCATGCTAGGCGAAGTACCGAAGATATCCGGCATCTTAAAAATGTGTGGATCAAATGCATATGTTGCTCAATCACCATGGATACAAAGTGGCAAGATAGAGGATAATATATTGTTTGGTAAGGAGATGGATAGGGATAGGTATGAGAAGGTACTTGAAGCCTGTTCCTTAAAGAAGGATCTTGAGATTTTGCCATTTGGTGATCAAACAATTATAGGAGAGCGTGGAATAAATATGAGTGGTGGACAGAAGCAAAGAATACAAATTGCACGCGCTCTTTACCAAGATGCTGATATATATCTATTTGATGATCCTTTTAGTGCAGTGGATGCTCATACAGGTTCTCACCTCTTTAAGGAATGCTTGATGGGCCTCTTGAGTTCAAAGACTGTGGTTTATGTCACTCATCAAGTGGAGTTCTTACCTTCTGCTGATCTTATATTGGTAATGAAAGATGGGAATATCAGTCAATGTGGTAAGTATGCTGATCTGCTTAAAACTGGATCTGTTTTTATGGAACTTGTTGGTGCACATGAACAAGCTATGTCTACACTAAATTCACAAGATGAAGAGACAATTTCTAATGAAATAAGTACATTGGAACAAGATGCAATTGTCTCCGGTAAACTCGATGTTATAGAAAAAGATTCAAACAATGGTAAAACAGATGAAAACAGTGAGCCAATAGGACAACTTGTGCAAGAAGAAGAAAGAGAGAAAGGAAAAGTTGGGTTTTCAGTATATTGGAGTTATATCACAATGGCATTTGGAGGAGCTCTGGTACCAGTTATATTGTTGGTTCAGATTCTCTTCCAAGTTCTTCAAATTGGAAGCAACTATTGGATGGCTTGGGCAACTCCTATCTCATCAGATGTTGAGCCTCCTGTTGGAGAAATAACCCTTATTGCAGTTTATGTTGGTTTGTCTTTTGGAAGTGCTTTATGCATACTTGCTAGAGTAATGTTTCTTATCATAATTGGTTTTGAGACTGCCACTATACTCTTCAATAAGATGCATCACTGCATTTTCCGCGCAGCAATGTCCTTTTTTGATTCCACTCCAAGTGGACGAATCCTTAATAGAGCTTCTACTGACCAAAGTGCAGTAGATACAGAGATTCCTTATCAAATTAATGGATTTTCCTTATCGTTGATCCAGCTTTTTGGAATTATAGCAGTGATGTCTCAGGTTGCATGGCAAGTTTTCATTGTTTTTATACCAGTGATAGCAATCAGCATCTGTTATCAGCAACATTATATATCATCGGCACGGGAACTATCACGTTTACTTGGAGTAACCAAAGCCCCAATCATTCAACACTTTGGTGAAACAATTTCGGGTATATCAACCATTAGAAGCTTTGATCAGCAGTCAAGATTTCAACAATCAAATATGAAACTGAACGATGCATATTCTCGGCCATGCTTCAATATTGCTGGTGCTATGGAATGGTTGTGCTTCCGCTTAGATATGTTGTCTTCTATTACATTTGCCTTTTCCTTGATAGTCTTGATATCTATTCCACAGGGAGTCATAGATCCAGCCATGGCTGGTTTAGCTGTTACATATGGACTTAAATTAAACATGATTCAAGCTTGGGTGATATGGAACATTTGTAACTTGGAGAACCAAATTATATCAGTAGAAAGAATGCTACAATATACTTGCATTCCTAGTGAGCCTTCCCTTGTTATTGAAGAAAATCGACCCGATCCTTCTTGGCCCTCATATGGGGAGGTTGTTATACATGACTTGCAGGTTCGTTATGCGCCTCATCTTCCACTCGTGTTGCGTGGCCTCACTTGCACATTTCGTGGAGGACAGAGAACTGGCATTGTTGGGAGAACAGGAAGTGGTAAATCAACTCTCATACAAGCACTTTTCCGAATTGTTGAACCTACTGCTGGGCGAGTTATGATTGACGGCATCGACATATCTTCAATTGGACTTCATGATTTGAGGTCTAGACTAAGCATCATTCCTCAGGATCCAACCATGTTTGAAGGAACAGTTAGAAACAATCTAGACCCACTTGAAGAATACTCAGATGAACAAATTTGGGAGGCCTTAGATAAGTGTCAACTTGGAGATGAAGTTAGAAATAAAGAAGGAAAGTTAGACTCTCCAGTTAGCGAAAACGGCGAAAACTGGAGCATGGGTCAGAGACAATTAGTGTGCCTAGGTAGAGTGTTGCTCAAGAAAAGCAAAGTTTTGGTGCTTGATGAAGCCACTGCATCAGTTGATACAGCTACAGATAATATGATTCAGCAAACTCTTAAGCAACATTTCACAAACTCTACAGTCATTACAATAGCACATCGAATAACATCTGTTATTGACAGTAACATGGTTTTGCTTCTTAACCAAGGACTTATTGAGGAGTATGATACTCCTACAACATTGCTAGAGGATAAGTCATCATCTTTTGCTCAACTTGTTGAAGAATATACCATGAGATCTAGATCCCAAAATTGA 4482 0.3858 MMFFSSSFSFMHSSTDFLLKPIVLHGLSASFHLLSLSVVLVSWVWNKFTVGTRHEYQEKSNDTLLKKPFFCSLGASAFNILLCLFNFFWYRSGWTEEKAVTLFDLALKTVAWGVVCVCLHKQYFFLCSGGRRFSSFFKTWCVLYFFISCYCLVVDIVFLYGKHVVLPFQYLVSDAVSTCVGLFFCYVGYFVNNDNEGSSILQEPLLNGDTYVRNGLGSKETKGDDTVTPFSNASIFSILTFSWVGPLIALGNKKTIDLKDVPQLDSRNSIVGAFPKFRDDLEADCGAVNNVTSLKLAKSLVLSAWKYILFTGFLALLNTLASYVGPYLIDSFVQYLNGRRLYENQGYMLVSAFFFAKLIECLTQRHQVFWLQQVGIRIRALIVTMVYNKALNLSCQSRKDHTSGEIINFMSVDAETIGGFAWSIHNLWLVPLQVMLALLILYKNLGLASIAAFVATVLIMLLNFPLGSFQKKFQSKMMEAKDTRMKATSEVLRNMRILKLQGWEMKFLSKITEFRKTEQGWLKKYLFTSSISAFVFWCTPMFVSAVSFGTCILIGIPLESGKILSALATFRILQESIYGIPDTISEVAQTKVSLYRISSFLRLQDQQLDVVERLPRGSSNTAIEIVDGNFSWDLSSPNTALKNINLKVSSGMNVAVCGTVGSGKSTLLSCMLGEVPKISGILKMCGSNAYVAQSPWIQSGKIEDNILFGKEMDRDRYEKVLEACSLKKDLEILPFGDQTIIGERGINMSGGQKQRIQIARALYQDADIYLFDDPFSAVDAHTGSHLFKECLMGLLSSKTVVYVTHQVEFLPSADLILVMKDGNISQCGKYADLLKTGSVFMELVGAHEQAMSTLNSQDEETISNEISTLEQDAIVSGKLDVIEKDSNNGKTDENSEPIGQLVQEEEREKGKVGFSVYWSYITMAFGGALVPVILLVQILFQVLQIGSNYWMAWATPISSDVEPPVGEITLIAVYVGLSFGSALCILARVMFLIIIGFETATILFNKMHHCIFRAAMSFFDSTPSGRILNRASTDQSAVDTEIPYQINGFSLSLIQLFGIIAVMSQVAWQVFIVFIPVIAISICYQQHYISSARELSRLLGVTKAPIIQHFGETISGISTIRSFDQQSRFQQSNMKLNDAYSRPCFNIAGAMEWLCFRLDMLSSITFAFSLIVLISIPQGVIDPAMAGLAVTYGLKLNMIQAWVIWNICNLENQIISVERMLQYTCIPSEPSLVIEENRPDPSWPSYGEVVIHDLQVRYAPHLPLVLRGLTCTFRGGQRTGIVGRTGSGKSTLIQALFRIVEPTAGRVMIDGIDISSIGLHDLRSRLSIIPQDPTMFEGTVRNNLDPLEEYSDEQIWEALDKCQLGDEVRNKEGKLDSPVSENGENWSMGQRQLVCLGRVLLKKSKVLVLDEATASVDTATDNMIQQTLKQHFTNSTVITIAHRITSVIDSNMVLLLNQGLIEEYDTPTTLLEDKSSSFAQLVEEYTMRSRSQN 1493
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal10g0918 1493 SUPERFAMILY ABC transporter transmembrane region 300 601 IPR036640 GO:0005524|GO:0016021
Lal10g0918 1493 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 932 1212 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Lal10g0918 1493 SUPERFAMILY ABC transporter transmembrane region 931 1229 IPR036640 GO:0005524|GO:0016021
Lal10g0918 1493 SMART AAA_5 650 823 IPR003593 -
Lal10g0918 1493 SMART AAA_5 1275 1466 IPR003593 -
Lal10g0918 1493 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1251 1483 IPR003439 GO:0005524
Lal10g0918 1493 CDD ABC_6TM_ABCC_D2 930 1224 IPR044726 GO:0140359
Lal10g0918 1493 Gene3D ABC transporter type 1, transmembrane domain 894 1230 IPR036640 GO:0005524|GO:0016021
Lal10g0918 1493 Pfam ABC transporter 1267 1414 IPR003439 GO:0005524
Lal10g0918 1493 Pfam ABC transporter 641 775 IPR003439 GO:0005524
Lal10g0918 1493 ProSitePatterns ABC transporters family signature. 748 762 IPR017871 GO:0005524
Lal10g0918 1493 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 623 846 IPR003439 GO:0005524
Lal10g0918 1493 Gene3D - 1232 1485 IPR027417 -
Lal10g0918 1493 Pfam ABC transporter transmembrane region 309 575 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Lal10g0918 1493 Pfam ABC transporter transmembrane region 933 1172 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Lal10g0918 1493 CDD ABCC_MRP_domain2 1247 1467 - -
Lal10g0918 1493 Gene3D ABC transporter type 1, transmembrane domain 298 600 IPR036640 GO:0005524|GO:0016021
Lal10g0918 1493 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1241 1481 IPR027417 -
Lal10g0918 1493 PANTHER ATP-BINDING CASSETTE SUB-FAMILY C 101 1491 - -
Lal10g0918 1493 CDD ABC_6TM_ABCC_D1 310 597 IPR044746 GO:0140359
Lal10g0918 1493 Gene3D - 601 872 IPR027417 -
Lal10g0918 1493 CDD ABCC_MRP_domain1 623 822 - -
Lal10g0918 1493 PANTHER MULTIDRUG RESISTANCE PROTEIN ABC TRANSPORTER FAMILY PROTEIN 101 1491 - -
Lal10g0918 1493 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 620 845 IPR027417 -
Lal10g0918 1493 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 309 589 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal10g0918 Lal-Chr10 16582616 16588367 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal10g0918 623 853 Calmodulin-binding Proteins AT2G36910 31.076 9.86e-27 117
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal10g0918 - K05666 gmx:100777836 2272.28