Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal10g0871 ATGGCAATAGCAACGGCTATTTTTCTTTGCTTCCTCACGGTGGCGCATTTTACCGCCACCACCTTAACATGCACCGCGACAACGTTAGAAGAGATCGAAGCCTTAACAACGTTTAAAGCCAATCTCGACGACCCATTTGGCTTCTTGGACGGTTGGGATTCATCCACGCCATCAGCACCATGTGACTGGCATGGCATTCTTTGTTCTTCCAACAAGAAACGAGTTCACCAACTCACCTTGCCTCGTCTTCAACTCAGTGGGTCAATATCAAACTCACTTTCAAAGTTAACTCAGCTTCGAAAACTTAATCTCCATAACAATAACTTCACTGGTTCTATTCCTTCTTCTTTATCAAACTGCATTCTTCTACGTACCATTTATCTTCATAATAACTCTCTCACCGGAAAGTTACCATTTTCTCTTCTTAATCTCACAAACCTTCAAGTTTTCAACGTTGCTCATAACTTTCTGACCGGAAAAGTTCCCGGAGAAGTTTCAAACTCGTTGACTTTCCTTGACTTGTCGTGGAACTCGTTCTCTGATGATATTCCGGGGAATTTTTCTTCAAAGTCTCAAATGAGGATCATGAACTTGTCGTATAACAGTTTCAGCGGTGGAATACCCTTCACTATTGGAATGTTGCAAAAGCTTGAGTTTTTGTATCTAGACTCAAATTTTCTTCATGGGACTTTCCCTTCAGCACTTGTCAATTGCACCAACCTTGTGATTTTCAGTGCTGTGGATAATTCCATTGGTGGGTTGGTTCCTTCTACAATAGGGTCAATGCCAAAGCTTAAAGTTTTGTCTTTGATGCAAAATCGGGTCTCGGGTTGGGTACCCTTTTCATTGTTATGCAATGTGGGTAACAAATCTTCTTCTTTAAGCATTGTTGAATTAGGCTTTAATGCCATCACGGGTGTTTCTAAGCCACCAAATAATGAAAAATGTTTCACATTTTTGGAGGTTTTGGACCTTAAAGAGAATCACATTCACAATACATTGTTCCCTTCATGGTTGTTGACCAATGCAACTTCATTAAGGTCTCTTGATCTTTCGGGAAACTCATTTTCGGGTGTTTTGCCGGTCGAAATTGGGAATCTGGTTAATTTGGAGGAGCTGAGGTTGGGGAGTAATTCATTATCAGGAAGAGTCCCTAGTGAAATTGTGAAATGTGAGTTGTTGCAGGTTCTTGATCTTCAAGGGAACAAGTTTTCTGGTCATGTTCCTTCTTTTTTTGGTGAATTAAGGAGCCTCAGGATTTTATCCCTTGGTGGGAACTTGTTTACTGGTTCTGTGCCAAAGAGTTATGGAACACTTTCATCACTAGAGGTGTTAGATTTAAGCAACAATAATCTGTCAGGGATTATGTCTCAGGAGATAATGAGATTAAGCAACATGAGTGCTTTAAATCTCAGTAATAACAAATTTTCTGGCCAAGTTTTATCTGATATTGATATTGGGGACTTGACAAATTTGCAGGTTCTTAACTTGAGCCAATGTGGATTTTCAGGAAGAGTTCCAAGTAGTGTTGGAAGTTTAATGAAGCTAACAGTGTTGGATTTGAGCAAGCAAAATCTCTCTGGTGAGTTACCAATTGAGCTTTTTGGATTACCAAGCTTACAAGTTGTTGAACTTGAAGAGAATCATTTATCCGGGGCTGTTCCGGAAGGTTTCAGCAGCATAGTTAGCTTAAGGCATCTCAATCTCACATCCAATGCCTTTGTTGGTGAAATTCCAGCAACCTATGGATTTCTTCAGTCCTTGGTTGTTCTTTCTTTGTCACACAATAGTGTTTCTGGTAACATACCTTTGGAGATTGGTAATTGTTCTCAGCTTCAAGTGCTGGAGTTGGAGTCTAATCATTTGCATGGTACCATTCCAGGTGATATTTCTCATCTCTCTAGCTTAAAGGAGCTTAATTTGGGAGATAATAGATTAAGTGGAGATATCCCAAGTGAAATTTCACAATGTTCTGCTTTGAATTTACTCTTGTTGAATGGTAATCATTTAACGGGTCGCATACCACAATCATTGTCAAAACTATCAAACCTGATTGAGTTGAATCTTTCATCAAATCAATTGAATGGAGAAATTCCAGTTAATCTTTCACAAATTTCTGGTTTGAAGTATTTGAACTTGTCTAGGAATAATCTCGATGGTGAAATTCCAGAAGTGCTTGGTTCTAGATTCAGCGACCCTTCTGTATATGCAATGAACCAGAGGTTATGTGGAAAACCTTTGAAAAGTGAATGTAAAAATGTGAGAAGGAAAAGGAGGAAAAGGCTCATAATATTTGTAGGTGTGGCATTAGCTGGAGTGTGCTTTTTGGGGTTGTTTTGTTGTGTCTATATTTACAGTTTGTTAAGGTGGCGCAAGAAGCTTAGAGAAGGGGTAACTGGAGAGAAGAGAAGGAGTCCTAATAGTGCAAGCTCGGGAGCGGATAGAGGACGAGCGAGTAGTGAAAATGGAGGACCAAAACTTGTGATGTTCAATGGTAAGATTACTTATGCTGAGACATTAGAAGCAACAAGACACTTTGATGAGGAAAATGTTTTGAGTAGGGGAAGATATGGTCTAGTGTTCAAAGCCTCTTATCTAGATGGCATGGTTCTCTCGATTCGTCGTTTACCTGAAGGATTCATCAATGAGGCCATTTTTCGCAAAGAAGCAGAATCACTGGGCAAAGTGAAGCATAGAAATTTGACGGTTCTTCGCGGCTACTATGCAGGACCACCAACCGATGTGAGGCTCTTGGTTTATGATTACATGCCTAATGGTAACTTAGGGACATTACTTCAAGAGGCTTCTCAGCAAGACGGGCATGTGTTGAATTGGCCAATGCGGCATCTCATCGCATTAGGCATTGCTCGTGGCTTAGCCTTCTTGCATTCAGTGCCAATAGTCCACGGTGATGTGAAGCCGCAAAACGTGCTCTTTGATGCTGATTTTGAAGCCCATTTGTCCGAATTCGGGTTAGAGAGGTTAACAAGTATTGCAAACCCAGCTGAAGCATCATCGTCATCCACTCCTATTGGTTCGTTAGGCTATGTGTCACCAGAAGCAGCATTGACCGGACAAGCTACAAAAGAAGGCGATGTGTATAGCTTTGGAATCGTGCTGTTGGAGATACTAACGGGAAGGAAGCCGGTTATGTTCACACAAGATGAAGATATAGTGAAATGGGTTAAGAAACAATTACAAAGGGGACAAATATTGGAGTTGTTGGAACCGGGATTGCTTGAACTTGATCCAGAGTCATCAGAATGGGAAGAGTTCTTGTTGGGTATAAAAGTTGCTCTTCTTTGCACAGCACCTGATCCTCTTGATAGACCATCAATGACTGATATTGTTTTCATGCTTGAAGGTTGCAGGGTTGGACCTGAAATGCCATCATCACCTGATCTTACAACACTGCCTTCTCCTCTTTGA 3429 0.4083 MAIATAIFLCFLTVAHFTATTLTCTATTLEEIEALTTFKANLDDPFGFLDGWDSSTPSAPCDWHGILCSSNKKRVHQLTLPRLQLSGSISNSLSKLTQLRKLNLHNNNFTGSIPSSLSNCILLRTIYLHNNSLTGKLPFSLLNLTNLQVFNVAHNFLTGKVPGEVSNSLTFLDLSWNSFSDDIPGNFSSKSQMRIMNLSYNSFSGGIPFTIGMLQKLEFLYLDSNFLHGTFPSALVNCTNLVIFSAVDNSIGGLVPSTIGSMPKLKVLSLMQNRVSGWVPFSLLCNVGNKSSSLSIVELGFNAITGVSKPPNNEKCFTFLEVLDLKENHIHNTLFPSWLLTNATSLRSLDLSGNSFSGVLPVEIGNLVNLEELRLGSNSLSGRVPSEIVKCELLQVLDLQGNKFSGHVPSFFGELRSLRILSLGGNLFTGSVPKSYGTLSSLEVLDLSNNNLSGIMSQEIMRLSNMSALNLSNNKFSGQVLSDIDIGDLTNLQVLNLSQCGFSGRVPSSVGSLMKLTVLDLSKQNLSGELPIELFGLPSLQVVELEENHLSGAVPEGFSSIVSLRHLNLTSNAFVGEIPATYGFLQSLVVLSLSHNSVSGNIPLEIGNCSQLQVLELESNHLHGTIPGDISHLSSLKELNLGDNRLSGDIPSEISQCSALNLLLLNGNHLTGRIPQSLSKLSNLIELNLSSNQLNGEIPVNLSQISGLKYLNLSRNNLDGEIPEVLGSRFSDPSVYAMNQRLCGKPLKSECKNVRRKRRKRLIIFVGVALAGVCFLGLFCCVYIYSLLRWRKKLREGVTGEKRRSPNSASSGADRGRASSENGGPKLVMFNGKITYAETLEATRHFDEENVLSRGRYGLVFKASYLDGMVLSIRRLPEGFINEAIFRKEAESLGKVKHRNLTVLRGYYAGPPTDVRLLVYDYMPNGNLGTLLQEASQQDGHVLNWPMRHLIALGIARGLAFLHSVPIVHGDVKPQNVLFDADFEAHLSEFGLERLTSIANPAEASSSSTPIGSLGYVSPEAALTGQATKEGDVYSFGIVLLEILTGRKPVMFTQDEDIVKWVKKQLQRGQILELLEPGLLELDPESSEWEEFLLGIKVALLCTAPDPLDRPSMTDIVFMLEGCRVGPEMPSSPDLTTLPSPL 1142
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal10g0871 1142 Pfam Protein kinase domain 848 1117 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal10g0871 1142 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 4 1135 - -
Lal10g0871 1142 SUPERFAMILY Protein kinase-like (PK-like) 827 1135 IPR011009 -
Lal10g0871 1142 ProSiteProfiles Leucine-rich repeat profile. 441 462 IPR001611 GO:0005515
Lal10g0871 1142 Gene3D Ribonuclease Inhibitor 389 483 IPR032675 -
Lal10g0871 1142 Gene3D Ribonuclease Inhibitor 306 388 IPR032675 -
Lal10g0871 1142 SMART LRR_typ_2 415 438 IPR003591 -
Lal10g0871 1142 SMART LRR_typ_2 214 238 IPR003591 -
Lal10g0871 1142 SMART LRR_typ_2 633 657 IPR003591 -
Lal10g0871 1142 SMART LRR_typ_2 705 729 IPR003591 -
Lal10g0871 1142 SMART LRR_typ_2 344 366 IPR003591 -
Lal10g0871 1142 SMART LRR_typ_2 96 120 IPR003591 -
Lal10g0871 1142 SMART LRR_typ_2 367 391 IPR003591 -
Lal10g0871 1142 SMART LRR_typ_2 144 168 IPR003591 -
Lal10g0871 1142 SMART LRR_typ_2 489 513 IPR003591 -
Lal10g0871 1142 SMART LRR_typ_2 317 342 IPR003591 -
Lal10g0871 1142 SMART LRR_typ_2 585 609 IPR003591 -
Lal10g0871 1142 SMART LRR_typ_2 439 462 IPR003591 -
Lal10g0871 1142 SMART LRR_typ_2 537 560 IPR003591 -
Lal10g0871 1142 SMART LRR_typ_2 681 704 IPR003591 -
Lal10g0871 1142 Pfam Leucine Rich repeat 166 182 IPR001611 GO:0005515
Lal10g0871 1142 Gene3D Transferase(Phosphotransferase) domain 1 923 1129 - -
Lal10g0871 1142 Gene3D Phosphorylase Kinase; domain 1 814 922 - -
Lal10g0871 1142 PRINTS Leucine-rich repeat signature 346 359 - -
Lal10g0871 1142 PRINTS Leucine-rich repeat signature 439 452 - -
Lal10g0871 1142 ProSiteProfiles Protein kinase domain profile. 846 1129 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal10g0871 1142 Gene3D Ribonuclease Inhibitor 484 754 IPR032675 -
Lal10g0871 1142 Gene3D Ribonuclease Inhibitor 168 305 IPR032675 -
Lal10g0871 1142 Gene3D Ribonuclease Inhibitor 28 167 IPR032675 -
Lal10g0871 1142 Pfam Leucine Rich Repeat 98 120 IPR001611 GO:0005515
Lal10g0871 1142 Pfam Leucine Rich Repeat 491 513 IPR001611 GO:0005515
Lal10g0871 1142 SUPERFAMILY L domain-like 28 331 - -
Lal10g0871 1142 ProSiteProfiles Leucine-rich repeat profile. 635 657 IPR001611 GO:0005515
Lal10g0871 1142 Pfam Leucine rich repeat N-terminal domain 30 69 IPR013210 -
Lal10g0871 1142 PANTHER LRR RECEPTOR-LIKE KINASE 4 1135 - -
Lal10g0871 1142 MobiDBLite consensus disorder prediction 803 817 - -
Lal10g0871 1142 Pfam Leucine rich repeat 515 573 IPR001611 GO:0005515
Lal10g0871 1142 Pfam Leucine rich repeat 345 404 IPR001611 GO:0005515
Lal10g0871 1142 Pfam Leucine rich repeat 416 476 IPR001611 GO:0005515
Lal10g0871 1142 Pfam Leucine rich repeat 611 670 IPR001611 GO:0005515
Lal10g0871 1142 SUPERFAMILY RNI-like 310 541 - -
Lal10g0871 1142 MobiDBLite consensus disorder prediction 799 826 - -
Lal10g0871 1142 SUPERFAMILY L domain-like 486 735 - -
Lal10g0871 1142 ProSitePatterns Serine/Threonine protein kinases active-site signature. 967 979 IPR008271 GO:0004672|GO:0006468
Lal10g0871 1142 SMART serkin_6 846 1119 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal10g0871 Lal-Chr10 16215175 16218603 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal10g0871 1 1141 Receptor kinase-like Gene Family AT4G36180 59.774 0.0 1281
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VII-3 Lal10g0871 Pkinase 3.2e-30 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal10g0871 - - jre:108991311 1551.57
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal10g0871 10 16215175 16218603 Lal10g0871 10 16215175 16218603 ECH