Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal10g0868 ATGGCAGATTCTTCAGGCTCAGCCACTTCCAGGAGAATGTGGTGCTCCATCCCAGAACGGTTTCAGCTGCATGTAGCCATGCTGCTCTTGCAGTTTGGCTATGCTGGGTTTCATGTGGTTTCTAGGGCTGCCCTTAACATGGGTGTCAGCAAACTTGTTTTCCCAGTTTATAGAAACATCATTGCTTTCCTTCTACTCCTTCCCTTTGCATATTTCTTGGAAAAGAAGGATAGGCCAGCAATTACTTTGAACTTCCTCAGCCAGTTCTTTCTTCTGGCACTTGTCGGGATAGAGCAAGTGAGAGTGAACAGAAAGGATGGGGTAGCTAAGATATCAGGAACCATATTATGTGTTGCAGGAGCAACAGTGATTACACTCTACAAGGGTCCAACAATATACAGTCCAACTCCACCACTACATAGCAGTAGTATGATTACAACAACAACAACTACACCACAAATATTTGATTTTGGGTCACTATCACTTGGAGATGCAAAGGGCAAAAACTGGACCCTAGGTTGCCTCTACCTAATAGGGCATTGCTTGTCTTGGTCTGGTTGGCTTGTGTTGCAAGCACCTGTCCTTAAGAAATACCCAGCTCGCCTCTCTGTCACTTCCTACACTTGTTTCTTTGGACTCTTGCAATTTCTTCTTATTGCTTTGGTCCTTGAAAGAGATGCACAGGCTTGGGTTTTCCATTCTGGTGGAGAAGCTTTCACAATTTTATACGCTGGAGTGGTTGCATCTGGAATTGCCTTCGCTGTACAGATATGGTGTATTGATAGAGGTGGTCCTGTATTTGTTGCTGTATATCAACCTGTTCAGACTTTTGTTGTAGCCATTATGGCTTCCCTTGCTTTAGGGGAAGAGTTCTACTTGGGCGGGATCATTGGGGCAGCATTGATAGTAGCAGGACTATACCTAGTTTTGTGGGGTAAAAATGAAGAGAAGAAATTTACAAAGGAAGAACTTGCTATTTCATTCAATGTGGAGAATAGCATTATCAGACCCACAAGCCATGTTAAAGCATCACTTACTCAACCACTTCTTCCATCATCAACAGAGAATGTTTGA 1074 0.4339 MADSSGSATSRRMWCSIPERFQLHVAMLLLQFGYAGFHVVSRAALNMGVSKLVFPVYRNIIAFLLLLPFAYFLEKKDRPAITLNFLSQFFLLALVGIEQVRVNRKDGVAKISGTILCVAGATVITLYKGPTIYSPTPPLHSSSMITTTTTTPQIFDFGSLSLGDAKGKNWTLGCLYLIGHCLSWSGWLVLQAPVLKKYPARLSVTSYTCFFGLLQFLLIALVLERDAQAWVFHSGGEAFTILYAGVVASGIAFAVQIWCIDRGGPVFVAVYQPVQTFVVAIMASLALGEEFYLGGIIGAALIVAGLYLVLWGKNEEKKFTKEELAISFNVENSIIRPTSHVKASLTQPLLPSSTENV 357
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal10g0868 357 PANTHER WAT1-RELATED PROTEIN 16 97 IPR030184 GO:0016021|GO:0022857
Lal10g0868 357 PANTHER WAT1-RELATED PROTEIN 97 343 IPR030184 GO:0016021|GO:0022857
Lal10g0868 357 SUPERFAMILY Multidrug resistance efflux transporter EmrE 214 315 - -
Lal10g0868 357 PANTHER WAT1-RELATED PROTEIN 16 97 - -
Lal10g0868 357 PANTHER WAT1-RELATED PROTEIN 97 343 - -
Lal10g0868 357 Pfam EamA-like transporter family 172 310 IPR000620 GO:0016020|GO:0016021
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal10g0868 Lal-Chr10 16185446 16189089 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal10g0868 1 357 Nodulin-like Gene Family AT1G75500 64.750 1.34e-178 499
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal10g0868 - - gmx:100786714 559.681
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal10g0868 10 16185446 16189089 Lal10g0868 10 16185446 16189089 ECH
Lal8g0557 8 3864664 3868940 Lal10g0868 10 16185446 16189089 LSH
Lal25g0540 25 3937119 3940647 Lal10g0868 10 16185446 16189089 LSH
Lal8g0455 8 3029746 3031685 Lal10g0868 10 16185446 16189089 LSH
Lal10g0868 10 16185446 16189089 Lal21g0132 21 926979 929881 PCT
Lal21g0132 21 926979 929881 Lal10g0868 10 16185446 16189089 PCT