LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Lal10g0831	ATGGCTTTAGACACTGTTGCTGACACCATTTCTGAAATCAGAAAAAAGATGAATTTTTTACCCATTTTCTGTGACAAGAAGAAGAGTAATTCCATCACTGAAGATATCAAACAACATCTCTTAACCATGGAACGTGATCTTGTTCCAGTTCTGAAGCAAAGTGATGACAGCAACAAGATCATTGCAGATGAAAATGATAAGAAGACTCAAGCTTGGTTGATAAAAGTCACTGTTGAACTTACCAATTTGTTTAACTTGCTTGAGGATCTTGATCTTCCTCTGCTTCCAAAACAGAGGAGTATGATAGCATTAGCATCATTTTTCTCTCTACATAGCCCACTGCTGCAACAACTGAAGCAAATTGAAAAGAGACTGAGTGAAGTTGCTGCTGATGCAACAAGTTTGTCATTCAAGAATGTGAAGAAGTTTACCAACTTGTTAGATGCAAAGGATCAAGAAATGAAGATTGAAGGGAGAAATAATGAAAAAGAAGGCTATGTCCGAATGATTTTGGGGAGGAAAAAAGTAAGAGGTGTTGTTCCGGTGATTGTGATTTCGGGGATTCATGGGATGGGGAAGACAAAACTTGCTAAGTTTATTTGGGATGATGAGAATGTAAAGAGTGGTTTTGGTTTGATGGTTTGGATCGATGGCATCCGTGAGAAATTTTATGCCGATTCCATTGTGAAACGAATAATTCATGATTCAGTAATGAAGAAGATGAAAATTGAAGAGAAGGGTACGGAGGATTATGACTCTATTGTGATGGATCATGATAACAATCTCGAGGATGTGTTGAGAGGAACCAGATTCTTTCTCGTGCTAGATGATCTGCAGAACCATGACCGCGAAGAATGGGATAAGTTGCTCCACATTTTGAAGGGTGCACCAGCTGGTGGAGCAATTGTTATAACTACACAGAGTGAAATTGTAGCAAAGATGGTCTATCCACATTGTAGACAGCTACGGGGTCTACGTGAAGAGGATTCATGGTCTTTGTTTAACAAAATTGCAGGAGGAAGAGGTTCACATGACTCAAAAATCTTAGAGGCTCAGAAAAGGATGGTAAAGATGTGTTATGGAGTTCCTGTAGCCGTAATCACAATTGCAAAGCTGGTGAGTTCTCGTGAACCGAAGAATGAACTGGAAATAGATCAATTGAAGCATGAATTTATGCAAGAGATGCAGTTCAGATATTACAACAACCTTCCATCCTTGTGTCTAAAGCAATGCTTTGCTTATTGTTCATTCGTATTCTCTCAACTAAATCGTATTGGTGTTGAGACATTAATTAGATTTTGGATGGCTGAAGGATTTTTAGGACCTATAAATACTTCTTCTCCACACCAACCAGAAGATTTGGGTCTTGAGTGCATACAGGAATTACGTCACAGGTCAATAATCTTAGGTGGTGATGAAAATGAATATGGCATCATCACTTCATACCTCATGAATGCCAATCTAATGACAGACCTGGCAGCATTTGTCGCAGGCGAGGACAGCCTATGCATGGAAGATCACAACATGGATGTCAACGAAAGAGTCCAACGAGTTTTACTGACTACTGACTTGGATGTTTCAAACGGGATTCCTAAATCGCTATTTAAGAGTAATAAAAAACTGAGCACCATTCTCTTCTCTCGGCCTTCGCGGATTCCAAATGAGGTCAAGTTAAGCTGGTCTGCATGTGATGCAATTTTTTATGGATTCAAGAGGTTGCGCCTCTTGAATCTGCGAGATTTAGGCATAAAGGTGTTGCCTAGTTCAATCGGGGAGTTAAAGAGTTTAAGATACTTGACTCTGTCTAGAAATAACATGAAGAAACTTCCCAATTCCATTGGTGAGTTGAAGCATTTGCTGACCTTGATTCTGTCTGATTGTCACGAGCTCAGAGAATTGCCTAACGGAGTGAAGAATTTAGTGAGTCTGAGGCATCTGGCATTGGAGGGATGCCTGAATTTGGAGCATATGCCCTCTACGTTGAAGACGCTCACTTGGCTTCAGTCGTTGTCAAATTTTGTAGCTAGCACTAACAAGAAAAACAGCCAGAGTGGTGGACTTTGGGAGCTTATTAGTCTTAATAACTTGAGGGGAGCATTGGAGATTCTACACCTAGAAAGATTGCGGTTTAATGAATCTAAGCAGGATTGTCATGCTTATTTGAGCGAGAAAGAGCATCTTCAGTCCCTCACGCTGAGATGGAATCACGATGACGAGGCTGTGAACCATTCCGCGGAAGATGAGGTATCCTTAGCACATCTTGAGCCACATCAAAATTTACAAGGACTATCCATTATAGGGTATGAAGGTAAAGGGTTTTCAGATTGGTTGTTATCCAAATGTACTAATCTTGTGAAGTTCAGTTTGTACAACTGCTCTAAATGCAAAAGGCTCCCCCCATTGGATCAACTCCCTAAACTGAAAATTCTCCAACTTCAGAGACTGGACTCTCTGGAATTCATAGTAGATGATCGTGACAACGAGCCGGGAGTAGCTGAAACTACGGTATTTTTTCGATCCCTAAGAAAACTTGAAATATCGGATTGCCCAAACCTCACAAGTTGGTGGAAGGGCAGAATCAACAACAATGTTGTGTTTCCTCCCTTATCAAAATTGGAAATCAACCACTGTCCCAAACTAGATTGTATGCCATTGTATCCAAACGTCGACGGTGAACTGTTTTTACGATGCTCCAGCTTGAAATCATTGTCAGAGACTCTGAATTACATACCATCAAATTCAAGGTACTATCCTCCCCTCTCGAAATTGAAAGATTTGAGAATCGAAATCGCGGGGCAGGAACAACAACCTTATCTATCAAATGAGTGGCTAAAAAGCTTCACTTCTCTAAAGAAGCTTTCCATTGAGTGCAATGGTTTGAAGTCCTTAATGAAAGGTTTGAAATATCTTACCTCACTTCAGGAACTATATATTAAAAACTGTACAGAACTTTATATAGCTGGAGATGAATGGGAGGGTTTGATAAACCTACATAATCTTCACATACTACAATTCCCTAAGCTCAAATCTCTTCCAGAAGGTATTAAAAATCTTACATCTCTTAAGTATCTACGCATCGATACTTGTCCCGAGTTAGTGACTCTAACCGAGGGCATAGGCCAACTTAGATCACTTACATCTCTTTGTATCGAAGAATGCAACAAGCTAGCTTCATTGCCACAAGGAATGATCAACCTCATTTCTCTAAAGAAGTTACGCATTACAAACTGTTCCATCTTGTTCCCAAGGTGTCAAAAGGAAACTGGTGATGATTGGCCACAGATTAAACATATCAAACAAATTAACTTATGGGTTGATAATGTGAAGACAATGGAACTGGTACTGAAGTAA	3351	0.399	MALDTVADTISEIRKKMNFLPIFCDKKKSNSITEDIKQHLLTMERDLVPVLKQSDDSNKIIADENDKKTQAWLIKVTVELTNLFNLLEDLDLPLLPKQRSMIALASFFSLHSPLLQQLKQIEKRLSEVAADATSLSFKNVKKFTNLLDAKDQEMKIEGRNNEKEGYVRMILGRKKVRGVVPVIVISGIHGMGKTKLAKFIWDDENVKSGFGLMVWIDGIREKFYADSIVKRIIHDSVMKKMKIEEKGTEDYDSIVMDHDNNLEDVLRGTRFFLVLDDLQNHDREEWDKLLHILKGAPAGGAIVITTQSEIVAKMVYPHCRQLRGLREEDSWSLFNKIAGGRGSHDSKILEAQKRMVKMCYGVPVAVITIAKLVSSREPKNELEIDQLKHEFMQEMQFRYYNNLPSLCLKQCFAYCSFVFSQLNRIGVETLIRFWMAEGFLGPINTSSPHQPEDLGLECIQELRHRSIILGGDENEYGIITSYLMNANLMTDLAAFVAGEDSLCMEDHNMDVNERVQRVLLTTDLDVSNGIPKSLFKSNKKLSTILFSRPSRIPNEVKLSWSACDAIFYGFKRLRLLNLRDLGIKVLPSSIGELKSLRYLTLSRNNMKKLPNSIGELKHLLTLILSDCHELRELPNGVKNLVSLRHLALEGCLNLEHMPSTLKTLTWLQSLSNFVASTNKKNSQSGGLWELISLNNLRGALEILHLERLRFNESKQDCHAYLSEKEHLQSLTLRWNHDDEAVNHSAEDEVSLAHLEPHQNLQGLSIIGYEGKGFSDWLLSKCTNLVKFSLYNCSKCKRLPPLDQLPKLKILQLQRLDSLEFIVDDRDNEPGVAETTVFFRSLRKLEISDCPNLTSWWKGRINNNVVFPPLSKLEINHCPKLDCMPLYPNVDGELFLRCSSLKSLSETLNYIPSNSRYYPPLSKLKDLRIEIAGQEQQPYLSNEWLKSFTSLKKLSIECNGLKSLMKGLKYLTSLQELYIKNCTELYIAGDEWEGLINLHNLHILQFPKLKSLPEGIKNLTSLKYLRIDTCPELVTLTEGIGQLRSLTSLCIEECNKLASLPQGMINLISLKKLRITNCSILFPRCQKETGDDWPQIKHIKQINLWVDNVKTMELVLK	1116

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Lal10g0831	1116	PRINTS	Disease resistance protein signature	182	197	-	-
	Lal10g0831	1116	PRINTS	Disease resistance protein signature	265	279	-	-
	Lal10g0831	1116	PRINTS	Disease resistance protein signature	359	373	-	-
	Lal10g0831	1116	PRINTS	Disease resistance protein signature	614	630	-	-
	Lal10g0831	1116	Gene3D	-	324	403	IPR042197	-
	Lal10g0831	1116	Pfam	NB-ARC domain	182	392	IPR002182	GO:0043531
	Lal10g0831	1116	Gene3D	Ribonuclease Inhibitor	689	889	IPR032675	-
	Lal10g0831	1116	Gene3D	Ribonuclease Inhibitor	892	1043	IPR032675	-
	Lal10g0831	1116	Gene3D	Ribonuclease Inhibitor	520	684	IPR032675	-
	Lal10g0831	1116	SUPERFAMILY	RNI-like	840	1080	-	-
	Lal10g0831	1116	SUPERFAMILY	L domain-like	560	928	-	-
	Lal10g0831	1116	SUPERFAMILY	P-loop containing nucleoside triphosphate hydrolases	153	415	IPR027417	-
	Lal10g0831	1116	ProSiteProfiles	Leucine-rich repeat profile.	595	616	IPR001611	GO:0005515
	Lal10g0831	1116	PANTHER	DISEASE RESISTANCE PROTEIN RP	55	885	IPR044974	GO:0006952
	Lal10g0831	1116	PANTHER	OS05G0414200 PROTEIN	55	885	-	-
	Lal10g0831	1116	Gene3D	-	139	322	IPR027417	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Lal10g0831	Lal-Chr10	15936009	15940427	Dispersed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Lal10g0831	455	722	Leucine-rich Repeat extension Gene Families	AT4G13340	25.168	1.33e-07	53.9

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Lal10g0831	-		K19613	ahf:112797356	828.165