Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal10g0816 ATGACATTACATATTCCACTTTCTTTGATTTTTTTGATGAGGCTCGGAGCCATTAACTTGAAGCATGATCACGCCTCCGATTTTGACTCCGGCACCGGCGCTTCGGTTTCGTCGCCGGTTACTAGACAGAAAGCCGCCGCCGCTAAACATTTCATAGAGAATCATTACAAAAATTATCTCCAAGGTTTGCAAGATCGCAAGGATAGACGAAGAGCGTTTCAAAGGAAAGTACAAGAAGCGCAAATACCAGTTGAGGAGCAGGAGGAAATGATGAGGAGTTTGGAGCGTCGAGAAACTGAGTACATGAGGCTTCAGATACATAAAATTGGAATTGATGACTTTGAGCAATTAACAGTGATTGGCAAAGGTGCTTTTGGCGAGTTAAGGTTATGCCGTGCTAAAAGTACAGGAGAGATTTTTGCCATGAAGAAATTGAAGAAGTTAGAGATGCTTAGCCGCGGACAGGTGGAACATGTTCGGTCTGAGAGGAACTTGCTTGCAGAGGTTTATAGTAGATGCATAGTAAAACTCCATTACTCATTTCAAGATTCAGATTCCCTATATCTCATCATGGAGTACTTACCTGGTGGTGACATTATGACACTGTTAATGAGGGAAGATATTCTTTCTGAAGATGTTGCTCGTTTCTACATAGCTGAAAGCATTCTTGCTATTCACTCAATACATCAATACAACTATGCATATTCAACTGTTGGAACTCTTGATTATATGGCACCTGAAGTTTTGCTCAAGAAGGGCTATGGAATGGAATGTGATTGGTGGTCTCTTGGGGCGATCATGTATGAGATGCTTATTGGGTATCCTCCCTTTTGTTCTGATGATCCAAGGATGGCCTGCCGTAAGGCTCATCCATGGTTCAAGTCTGTTCAGTGGGACATGCTTTATGAGTTGGAAGCAGCCTATAAACCTACTGTCACTGGAGAGTTGGACACGCAAAACTTTGAGAAGTTTCCTGATGTAGATGGCCCACCATGCACAACAGCGACTGTTGGACCTTGGCAGAAGATGTTGACATCCAAAGACACCAACTTCATAGGATATACTTATAAGAAGTCAGACATCCTCAAATCACTTGAAAGTTCAGATGCAGATGTCAGGCTAAATGGATCTAGCACCCCTTCCTTGATTTCCTTGTTAGGCAAAACTGGAGTTATTCAATGA 1182 0.4247 MTLHIPLSLIFLMRLGAINLKHDHASDFDSGTGASVSSPVTRQKAAAAKHFIENHYKNYLQGLQDRKDRRRAFQRKVQEAQIPVEEQEEMMRSLERRETEYMRLQIHKIGIDDFEQLTVIGKGAFGELRLCRAKSTGEIFAMKKLKKLEMLSRGQVEHVRSERNLLAEVYSRCIVKLHYSFQDSDSLYLIMEYLPGGDIMTLLMREDILSEDVARFYIAESILAIHSIHQYNYAYSTVGTLDYMAPEVLLKKGYGMECDWWSLGAIMYEMLIGYPPFCSDDPRMACRKAHPWFKSVQWDMLYELEAAYKPTVTGELDTQNFEKFPDVDGPPCTTATVGPWQKMLTSKDTNFIGYTYKKSDILKSLESSDADVRLNGSSTPSLISLLGKTGVIQ 393
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal10g0816 393 Gene3D Phosphorylase Kinase; domain 1 53 236 - -
Lal10g0816 393 Pfam Protein kinase domain 114 234 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal10g0816 393 Pfam Protein kinase domain 236 282 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal10g0816 393 ProSiteProfiles AGC-kinase C-terminal domain profile. 294 366 IPR000961 GO:0004674|GO:0005524|GO:0006468
Lal10g0816 393 PANTHER NON-SPECIFIC SERINE/THREONINE PROTEIN KINASE 288 387 - -
Lal10g0816 393 PANTHER NON-SPECIFIC SERINE/THREONINE PROTEIN KINASE 35 234 - -
Lal10g0816 393 PANTHER NON-SPECIFIC SERINE/THREONINE PROTEIN KINASE 235 288 - -
Lal10g0816 393 ProSitePatterns Protein kinases ATP-binding region signature. 120 143 IPR017441 GO:0005524
Lal10g0816 393 Coils Coil 77 104 - -
Lal10g0816 393 ProSiteProfiles Protein kinase domain profile. 114 386 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal10g0816 393 SMART pkinase_C_6 294 358 IPR000961 GO:0004674|GO:0005524|GO:0006468
Lal10g0816 393 Pfam Protein kinase C terminal domain 312 356 IPR017892 GO:0004674|GO:0005524|GO:0006468
Lal10g0816 393 PANTHER SERINE/THREONINE-PROTEIN KINASE 288 387 - -
Lal10g0816 393 PANTHER SERINE/THREONINE-PROTEIN KINASE 235 288 - -
Lal10g0816 393 PANTHER SERINE/THREONINE-PROTEIN KINASE 35 234 - -
Lal10g0816 393 SUPERFAMILY Protein kinase-like (PK-like) 93 309 IPR011009 -
Lal10g0816 393 Gene3D Transferase(Phosphotransferase) domain 1 237 313 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal10g0816 Lal-Chr10 15830923 15838881 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal10g0816 234 391 AGC Kinase Gene Family AT5G09890 58.824 7.41e-78 247
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_NDR Lal10g0816 Pkinase 3.9e-23 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal10g0816 K08790 - pop:7475393 416.772