Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal10g0798 ATGGCTGTGAGGGTTACATTCTCCTACTCCCTCCACGTCGCCCAAAACCTTCTCTCCTCTTCTCTCACACGCGCCGCCACCAACCCCCGCTTCCAGGAATCCTGGACACGCGCCTGCTTATCCCAATCCAACGACAACAACCCTACCCTCCACCGTAATTACCACTTTGCCCCTACCACTCCCACCCTCGCATCGGCGATCCTGGGCGGTCATGCTGCGAACCCCATCGCACTCGGCCTGTTCTCGCTCCTGAGGTCATCCGCGACGTTGACGGAGGGTATATTTGGTATTTCACCGTTGAAGCCAGGTAAAATCATACCCTTTCTTCAGTTATCGAAGTGGCTCCCTTGTAGCGAACCGGTTCCCGGTTTGGGCGGTTCTGAGGGTAGGAAATTGTGTTTAAGTGTCACTGACACTAACACGAGTTCGAGTTCGGGTTCGGGTTCGAGTGTTGGGAATAGAAGAAGTTGGGTGTCGTGGTTGTTGAATATTAGTTCAGATGATGCGAAATCGGTGTTTACTGCCATGAGTGTTTACCTGCTGTACCGGTCATCCCTTGCTGAACCGAGATCGATTCCTACGTCTTCAATGTACCCAACTCTCAATGTTGGTGATTGCATTTTAGCAGAGAAGGTTTCTTTCTTCTTTAGAAAGCCTAATGTTTCCGATGTAGTAATATTTCAGGTGCCTCCAAATTTACAGGCAGCTGGCTATAATTCAGCTGAAGTGTTCATAAAAAGAATTGTGGCTAAGGCTGGGGACTGTGTTGAAGTCCGAGATGGAAAACTATTGGTAAATGGTGTTCCTCAAGAAGAAGAATTTGTATTAGAGCCACTTGCTTATCAGATGGATCCAGTGGTTGTGCCAGAAGGTTATGTCTTTGTGATGGGAGATAATCGTAATAACAGTTTTGACTCACATAACTGGGGTCCACTTCCTATCAAGTACATTCTTGGCAGATCCATGTTTCGGTACTGGCCTCCATCCCAAGTATCTAACTCTGTAAAGTATGGGTAA 1017 0.4779 MAVRVTFSYSLHVAQNLLSSSLTRAATNPRFQESWTRACLSQSNDNNPTLHRNYHFAPTTPTLASAILGGHAANPIALGLFSLLRSSATLTEGIFGISPLKPGKIIPFLQLSKWLPCSEPVPGLGGSEGRKLCLSVTDTNTSSSSGSGSSVGNRRSWVSWLLNISSDDAKSVFTAMSVYLLYRSSLAEPRSIPTSSMYPTLNVGDCILAEKVSFFFRKPNVSDVVIFQVPPNLQAAGYNSAEVFIKRIVAKAGDCVEVRDGKLLVNGVPQEEEFVLEPLAYQMDPVVVPEGYVFVMGDNRNNSFDSHNWGPLPIKYILGRSMFRYWPPSQVSNSVKYG 338
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal10g0798 338 PANTHER THYLAKOIDAL PROCESSING PEPTIDASE 2, CHLOROPLASTIC-RELATED 1 335 - -
Lal10g0798 338 PANTHER SIGNAL PEPTIDASE I 1 335 IPR000223 GO:0006508|GO:0008236|GO:0016020
Lal10g0798 338 CDD S26_SPase_I 188 320 IPR019533 GO:0004252|GO:0006465
Lal10g0798 338 TIGRFAM sigpep_I_bact: signal peptidase I 171 327 IPR000223 GO:0006508|GO:0008236|GO:0016020
Lal10g0798 338 Pfam Signal peptidase, peptidase S26 169 326 IPR019533 GO:0004252|GO:0006465
Lal10g0798 338 SUPERFAMILY LexA/Signal peptidase 183 332 IPR036286 -
Lal10g0798 338 ProSitePatterns Signal peptidases I signature 3. 293 306 IPR019758 GO:0004252|GO:0016021
Lal10g0798 338 Gene3D Umud Fragment, subunit A 182 337 - -
Lal10g0798 338 PRINTS Bacterial leader peptidase 1 (S26A) family signature 185 201 IPR000223 GO:0006508|GO:0008236|GO:0016020
Lal10g0798 338 PRINTS Bacterial leader peptidase 1 (S26A) family signature 244 256 IPR000223 GO:0006508|GO:0008236|GO:0016020
Lal10g0798 338 PRINTS Bacterial leader peptidase 1 (S26A) family signature 288 307 IPR000223 GO:0006508|GO:0008236|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal10g0798 Lal-Chr10 15704691 15709050 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal10g0798 197 327 MADS-box Gene Family AT1G29960 33.835 1.07e-16 73.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal10g0798 K03100 - mdm:114821684 369.777
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal10g0798 10 15704691 15709050 Lal10g0798 10 15704691 15709050 ECH