Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Lal10g0705 | ATGAGTAACTACGACTCCAACCCTTTCGCCGCCGAAGATGACGTTAATCCTTTCGCCGATGGAGGAGCTAAAGGGAAAGCGTCTGGGCAATCTAATTATGGTGGAGGTGCATTCTATACTACTAACCCTGGAAGTGTCCCCCCTGCAAAGTCAAAGCTCTCACCCCTTCCTCCGGAGCCTTATGATCGTGGGTCTGCAACTGTTGACATTCCTCTTGATACTGCCAAGGACATCAAAGAAAAGGAGAAGGCTCTTCAAGCTAGAGAGGCTGAATTGAAAAGAAGGGAACAGGAGCTAAAACGAAGGGAAGATGCTATAGCACGAGCTGGAATAGTTATAGAAGAAAAAAATTGGCCCCCTTTTATACCCATCATTCATCATGACATTGCAAATGAAATACCACTACATCTTCAGAGGGTCCAGTATGTTGCTTTTACAACATGGTTGGGTTTGGTTATATGTCTTTTATGGAATATTGTGGCCGTTACTGTAGCTTGGATCAAAGGAGATGGTGTAACAAACTGGTTTCTTGCTATCATATACTTTATTTCCGGTGTTCCAGCATCCTATGTAATGTGGTATCGCCCTCTTTATCGTGCTTCGAGGACAGATAGTGCTCTGAAGTTCGGCATGTTTTTCTTGTCTTATGGGGCAAGTCTCAGATATTTTCTCACTGTGCACATTGCATTTTGTGTTTTTTCTGCAGTTGCTCCTCCAATTGTCTTCAGAGGAAAATCTCTTACAGGGATTCTGCCTGCGCTTGAGGTGATGATAGACAGTACCTTGGTTGGGATATTCTACTTCATTGGGTTTGGATTTTTCTGCCTTGAATCACTGCTGAGCATATGGGTTATTCAGCAAGTTTACATGTACTTCCGCGGCAGCGGCAAGGCTGCGACACTGAAGCGCGAGGCCATGATGGCAGCCTTATGA | 933 | 0.4469 | MSNYDSNPFAAEDDVNPFADGGAKGKASGQSNYGGGAFYTTNPGSVPPAKSKLSPLPPEPYDRGSATVDIPLDTAKDIKEKEKALQAREAELKRREQELKRREDAIARAGIVIEEKNWPPFIPIIHHDIANEIPLHLQRVQYVAFTTWLGLVICLLWNIVAVTVAWIKGDGVTNWFLAIIYFISGVPASYVMWYRPLYRASRTDSALKFGMFFLSYGASLRYFLTVHIAFCVFSAVAPPIVFRGKSLTGILPALEVMIDSTLVGIFYFIGFGFFCLESLLSIWVIQQVYMYFRGSGKAATLKREAMMAAL | 310 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Lal10g0705 | 310 | MobiDBLite | consensus disorder prediction | 1 | 67 | - | - | |
| Lal10g0705 | 310 | MobiDBLite | consensus disorder prediction | 33 | 48 | - | - | |
| Lal10g0705 | 310 | Pfam | SCAMP family | 115 | 294 | IPR007273 | GO:0015031|GO:0016021 | |
| Lal10g0705 | 310 | Coils | Coil | 75 | 105 | - | - | |
| Lal10g0705 | 310 | PANTHER | SECRETORY CARRIER-ASSOCIATED MEMBRANE PROTEIN | 1 | 309 | - | - | |
| Lal10g0705 | 310 | PANTHER | SECRETORY CARRIER-ASSOCIATED MEMBRANE PROTEIN SCAMP | 1 | 309 | IPR007273 | GO:0015031|GO:0016021 |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Lal10g0705 | Lal-Chr10 | 14835983 | 14841748 | Dispersed/Wgd |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Lal10g0705 | 1 | 286 | Miscellaneous Gene Families | AT1G61250 | 66.096 | 1.48e-131 | 373 |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Lal10g0705 | K19995 | - | jre:109022292 | 471.47 |
Event-related genes
| Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
|---|---|---|---|---|---|---|---|---|---|
| Lal10g0705 | 10 | 14835983 | 14841748 | Lal10g0705 | 10 | 14835983 | 14841748 | ECH | |
| Lal10g0705 | 10 | 14835983 | 14841748 | Lal8g0805 | 8 | 5792532 | 5797437 | LSH | |
| Lal10g0705 | 10 | 14835983 | 14841748 | Lal1g0476 | 1 | 2991112 | 3004004 | PCT | |
| Lal1g0476 | 1 | 2991112 | 3004004 | Lal10g0705 | 10 | 14835983 | 14841748 | PCT |