Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal10g0703 ATGGGGTGTTGTGTCTCAACAAGCAGTAGGAGTACTTGTAGTAGCGGGAGCAATGGAGACACGGTAACTCCATCGTGTTTAGAACTCGGATTCTGTGGTCAAAATAGAGCAAGTAGAACATTCTCTGATCATGTTATCTCTCTGCATCAGTTACCATCCTTGCCAAACAGAATTGTCACTAATGGAAAGAGCCGGTCTTCCTGCTTATTCACACAGCAGGGTCGAAAGGGTGTTAATCAGGATGCTATGATTGTTTGGGAAGATTTCATGTCTGAAGATACGATTTTTTGTGGTGTCTTTGATGGCCATGGTCCCCATGGTCACCTTGTTGCCCGCAAAGCTCGGGATGTCTTACCCCTAAAACTGCTTTCGTCTTTGCATTCTTGTGAGTCAAAGCGAAGTAGCTCAGGTAAAGCTGGTTTCAAAGGGAATATAAAGCTTGACAATGGAGAGTCTGATAAGGATATCTCTGCCGAGGATGAACTGAATTCGATATGGAGAGAAGCTTTCCTGAAGGCATACAACGCTATGGACAAAGAGTTGAGGTCTCATAGAAATTTGGACTGCTTTTGTAGTGGTAGCACAGCTGTCACTATAGTTAAGAAGGGTTCAAATCTATTAATGGGTAGTATTGGGGATTCCCGGGCAATCATGGGATCCAAGGATAGCAACGACTCTATGTTCGCAATTCAGTTGACTGTTGATTTGAAGCCTGATTTGCCGAGGGAAGCAGAAAGAATTAAACGGTGTAAGGGTAGGGTATTTGCTTTGCAAGATGAGCCAGAAGTTCATAGGGTATGGTTGCCTTTTGATGATGCACCTGGATTAGCAATGGCTAGAGCATTCGGAGACTTTTGCTTAAAGGAATATGGAGTGATTTCTATACCCGAATTCTATCACCGGGTGCTTACGGATGCAGATCAGTTCATTGTCATTGCCTCAGATGGGGTCTGGGATGTTTTAAGCAATGAAGAGGTGGTTGAGATAGTATCTTCAGCACCTACTCGATCATCGGCTGCGAGGATTGTGGTGGCATCGGCAGCTCGAGAGTGGAAGCTTAAATATCCTACTTCAAAGATGGATGACTGTGCTGTTGTCTGCCTATTTTTGGATGGGAAAATGGACTCAGAATCTGATTGTGATGAGCAATGCTTTTCTTCTGCAATCATCCAGAGCAACCATTCTGGTAATCCAGTTGAATCAGATGATGTTCAAAAGTCTGAGCCATCTTTGCGAAGGAACTATACTGTTAGATCCTCAGAAGAAAATGTGACCTATGGAGGACTATCTGTTGATGCTGAAAATGGAATATCATCAGCTGAAGAGCAAAGCTGGTCCGGTCTGGAGGGCGTAACCCGAGTAAATTCATTGGTCCAGCTTCCTAGATTTTCTGAGGAAAGACCAAATGCTTTATTCATAATGCATGGTGTTAATATCATCAATTCTCAAGAGGTTTCATCTCAAAACCAATTGGCATTGAGAGAAGTAGCTCAACAT 1497 0.4335 MGCCVSTSSRSTCSSGSNGDTVTPSCLELGFCGQNRASRTFSDHVISLHQLPSLPNRIVTNGKSRSSCLFTQQGRKGVNQDAMIVWEDFMSEDTIFCGVFDGHGPHGHLVARKARDVLPLKLLSSLHSCESKRSSSGKAGFKGNIKLDNGESDKDISAEDELNSIWREAFLKAYNAMDKELRSHRNLDCFCSGSTAVTIVKKGSNLLMGSIGDSRAIMGSKDSNDSMFAIQLTVDLKPDLPREAERIKRCKGRVFALQDEPEVHRVWLPFDDAPGLAMARAFGDFCLKEYGVISIPEFYHRVLTDADQFIVIASDGVWDVLSNEEVVEIVSSAPTRSSAARIVVASAAREWKLKYPTSKMDDCAVVCLFLDGKMDSESDCDEQCFSSAIIQSNHSGNPVESDDVQKSEPSLRRNYTVRSSEENVTYGGLSVDAENGISSAEEQSWSGLEGVTRVNSLVQLPRFSEERPNALFIMHGVNIINSQEVSSQNQLALREVAQH 499
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal10g0703 499 Gene3D - 61 378 IPR036457 -
Lal10g0703 499 MobiDBLite consensus disorder prediction 1 20 - -
Lal10g0703 499 Pfam Protein phosphatase 2C 92 336 IPR001932 -
Lal10g0703 499 CDD PP2Cc 65 370 IPR001932 -
Lal10g0703 499 PANTHER PROTEIN PHOSPHATASE 2C 52-RELATED 1 458 - -
Lal10g0703 499 SUPERFAMILY PP2C-like 62 372 IPR036457 -
Lal10g0703 499 ProSiteProfiles PPM-type phosphatase domain profile. 66 370 IPR001932 -
Lal10g0703 499 PANTHER ALPHABET, ISOFORM E-RELATED 1 458 - -
Lal10g0703 499 SMART PP2C_4 55 368 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal10g0703 Lal-Chr10 14816190 14820101 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal10g0703 1 468 PP2C-type Phosphatase Gene Family AT1G03590 68.842 0.0 629
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal10g0703 - - gmx:100788149 805.438
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal10g0703 10 14816190 14820101 Lal10g0703 10 14816190 14820101 ECH
Lal10g0703 10 14816190 14820101 Lal8g0799 8 5764289 5768829 LSH
Lal10g0703 10 14816190 14820101 Lal1g0475 1 2981481 2985403 PCT
Lal10g0703 10 14816190 14820101 Lal2g0451 2 2735084 2747659 PCT
Lal1g0475 1 2981481 2985403 Lal10g0703 10 14816190 14820101 PCT
Lal2g0451 2 2735084 2747659 Lal10g0703 10 14816190 14820101 PCT