Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal10g0692 ATGAAGGTCTTTTGTGTATTAGTTCTTGTTGCTGATATGCTGGTTTATGCGCTGTATTCGTCTCCTTTGGCTTTTGATTTTCTACCTTTCAGAATTGCACCTTATATCAGGGTTGTTCTTTTTGTTCTGAATGTTAGCCAAAAGAAAAATCCTGTACATCCTATTTTGAGATACTCCAACTCCGAATTTGATGTCAGGGGGTTACGGGAAACCATCATTATCTTGGCTGGAATGCTTGGCACATACTTAAATGTCTTGGCTTTGGGGCTTCTGTTTCTTCTTTTTGCAAGTTGGGTGGCTTATGTGATGTTTGAAGATACAATACAAGGGAAAACAGTATTCACCTCCTATGGTACTACACTGTATCAGATATTTATTTTATTTACCACGTCCAATAATCCAGATGTTTGGGTTCCTGCCTACAAGGCTTCACGGTGGTATTGCTTATTTTTCATTCTCTTTGTGCTGTTGGGGGTTTACTTTGTTACAAACTTGGTCCTTGCCGTTGTTTATGACAGTTTCAAGGGTGAGCTTGTAAAACAAGTTTCTGAGACGGATCGTATGAGAAGAACCATGTTGGAGAAAGCTTTTGATTTCTTAGATACAAATAATGTTAGATATCTTAACAAAGATCAATGCATTAGGCTCTTTGAGGAGCTAAACAAGTACAGGACTTTGCCAAATATCTCCAGGGAAGAATTCGAGTTGATATTTGATGAGCTGGATGATACTCATGATGTGAAGATCAATAAGGATGAATTTGCTGATATTTGCAATGCCATTGCTTTAAAATTCCAGAAGGAGGATTGTCTATCTTACTTTGAGTATTTAGCATTCTACCATTCTCCTACCTCAAAGAAATTGAAAGCCTTTGTGAAGACCCCCATGTTTGGATACTTAGTGTCCTTCATTCTCTTGCTGAACCTGGGTGCTGTTATTGTTGAGACAACGCTTGATATACAAAATAGTTCTGCTCAAAAGGTGTGGCAAGTGGTTGAGTTCATTTTTGGGTGGATATACGTAATAGAAATGGCCCTAAAGGTTTATTCATTTGGATTTGAGAACTACTGGCGAGATGGTCAAAATCGCTTTGATTTTATTATCACGTTGATAATTGTCATTGGAGAAACTATAACTTTTGCTTCGCCTGATGGACAGACTTTTTTTTCAAATGGAGAATGGATTCGTTACCTTCTTCTTGCAAGAATGTTGAGGTTGATAAGGCTTCTAATGCATGTTAAGCAATACCGAGGCTTTGTTGCAACTTTTTTAACTCTTATACCAAGTTTGATGCCATACCTTGGGATCATATTTTGTGTCGTATGTGTTTATTGTTCACTCGGTGTACAGATATTTGGCGGAATGGTTAATGCTGGAAATCCCAAATTGGAAGCAACAGATCTTGCTGATAATGACTATTTGCTTTTTAATTTCAATGATTATCCAAATGGAATGGTGACACTTTTCAATTTGCTAGTCATGGGGAACTGGCAAGCATGGATGCAGAGCTACAAGGAATTAAGTGGGACTTCTTGGAGTTATGCATACTTCATTAGCTTCTACTTGATAAGTGTATTGCTGCTTTTGAATTTGGTTGTTGCTTTCGTCTTGGAGGCATTCTTTGCTGAAATTGATATTGAGTCATCAGAAACTTGTGATGAACAAGACAAGGAAGTTGAAGGAGATAAATTTCGGAGACGGTCTGTTGGCACAAAAACACGAAGCCAGAGGGTTGATGCACTTCTTCATCATATGTTGAGTGCTGAGTTATGTCAGACTGAGTCTTCTGATCCACCAAACTGA 1803 0.3816 MKVFCVLVLVADMLVYALYSSPLAFDFLPFRIAPYIRVVLFVLNVSQKKNPVHPILRYSNSEFDVRGLRETIIILAGMLGTYLNVLALGLLFLLFASWVAYVMFEDTIQGKTVFTSYGTTLYQIFILFTTSNNPDVWVPAYKASRWYCLFFILFVLLGVYFVTNLVLAVVYDSFKGELVKQVSETDRMRRTMLEKAFDFLDTNNVRYLNKDQCIRLFEELNKYRTLPNISREEFELIFDELDDTHDVKINKDEFADICNAIALKFQKEDCLSYFEYLAFYHSPTSKKLKAFVKTPMFGYLVSFILLLNLGAVIVETTLDIQNSSAQKVWQVVEFIFGWIYVIEMALKVYSFGFENYWRDGQNRFDFIITLIIVIGETITFASPDGQTFFSNGEWIRYLLLARMLRLIRLLMHVKQYRGFVATFLTLIPSLMPYLGIIFCVVCVYCSLGVQIFGGMVNAGNPKLEATDLADNDYLLFNFNDYPNGMVTLFNLLVMGNWQAWMQSYKELSGTSWSYAYFISFYLISVLLLLNLVVAFVLEAFFAEIDIESSETCDEQDKEVEGDKFRRRSVGTKTRSQRVDALLHHMLSAELCQTESSDPPN 600
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal10g0692 600 ProSiteProfiles EF-hand calcium-binding domain profile. 229 264 IPR002048 GO:0005509
Lal10g0692 600 Pfam Ion transport protein 66 175 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Lal10g0692 600 Pfam Ion transport protein 295 540 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Lal10g0692 600 Gene3D - 286 419 IPR027359 -
Lal10g0692 600 PANTHER BNACNNG16060D PROTEIN 2 599 - -
Lal10g0692 600 SUPERFAMILY EF-hand 185 276 IPR011992 -
Lal10g0692 600 SUPERFAMILY Voltage-gated potassium channels 294 540 - -
Lal10g0692 600 PANTHER TWO PORE CALCIUM CHANNEL PROTEIN 1 2 599 IPR044581 GO:0005245
Lal10g0692 600 Gene3D - 420 580 - -
Lal10g0692 600 Gene3D - 67 174 - -
Lal10g0692 600 Gene3D - 175 258 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal10g0692 1 596 Ion Channels AT4G03560 68.007 0.0 853
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal10g0692 K16900 - gmx:100806160 924.85
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal10g0692 10 14716332 14729225 Lal10g0692 10 14716332 14729225 ECH