Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal10g0689 ATGGGTTGCATAACTTCAAAGAATTTAATTGTGGAAGATAGCACAGAAGATTTGAGAACGAAATTGACATCATGTAGCAAAAGGGAAACCTCAGAAATGAATGTTTCGCGATTGAATTCCTCGAAAAGGGTTGAGGGAGTTCGGGAGAGGGATACGTTATTCAATGGAGTTGGCATGAAAGCATCATTGCTTGACAAGAATGCTAGCGGTTCAGTGGAGTTGTATGATGATGATAATGTTGATCAGAATGGGCAGATGAAAATGGAGAAACCCGGATTGACTTTTCTTAATCGTCCTAGTCTTGGAAGGATTCTGAAGGCTTCAGAAGGAGAGCAAGTTGCAGCAGGATGGCCAACTTGGCTTTCTTCGGCTGCTGGTGAAGCTATTGAGGGGTGGATACCGCGTAGTGCAAATACTTTTGAGAGGTTTTTCAAGGTTGGCCAAGGAACTTACAGCACTGTTTATAAGGCACACGATTTGACTACCCAAAAGATTGTTGCCTTGAAGAGGGTACGCTTCGATAGTCTTGATCCTGAGAGTGTCAAGTTCATGGCCAGGGAAATCCTTGTTCTGCGTCGGCTTGACCACCCAAATGTAATAAAGTTGGAGGGCTTGATAACATCACAGACATCTCGCAGCTTGTACCTTGTTTTTGAATATATGGAACATGATCTTACTGGACTTTCATCAGATCCCAGCATTAAATTTTCTGAACCACAGGTTAAATGTTACATGCAGCAGCTTCTTAGTGGATTGGATCATTGTCATAGTCGTGGCGTCCTCCACCGTGACATAAAGGGATCAAATCTCCTCATTGACAATAATGGCATATTAAAGATTGCAGATTGGGGTTTGGCAACTTTTTTTGACTCTAATCACAGTGTTCCAATGACCAGCCGCGTAGTAACTCTGTGGTATAGACCACCAGAACTTTTACTGGGAGTGTCTCACTATGGAGTTGCAGTGGATTTGTGGAGCACTGGCTGCATTCTAGGGGAACTATATTCTGGCAGGCCCATATTGCCTGGAAAAACAGAGGTTGAGCAATTGCATAAGATTTTTAAACTTTGTGGCTCGCCACCTGAGGAGTATTGGTTTAAATTGCGGTTGCGACATTCAACAGCATTCAGGCCTCCACATCATTATAGGCGTTGTGTTGCAGAAACATTCAAAGAATGTCCATCTGTTGCAGTGAAGCTTATAGAGACTCTACTTTCTGTAGATCCTGCACATCGAGGAACAGCGGCTACTGCTCTGACGAGTGAGGTTGGTGGGGTTATGTTTTTAGCAAGTGCGTTCTTCTCATCGGAACCCCTTGCTTGTGATCCATCAACTTTACCAAAATATCCTCCTTGCAAAGAGATTGACAGTAAATTGCGGGATGGAGCAACGAGAAGGCAAGGAGATGCTGGTGAAAAGGAGCGAAAAGTAGGATCGGGAGTTAGAAAAGAGAAAGAACTTAAATCATTTGTTTCATCGAAAGACAACTCCGAGTCCCACATACAATTTCAGCAAGGGCAACATATTTCGAGCTCAAAGAGCCGGAGTGGATTGCTCAACCCTCAAGGAGAACCTGTGTCTGGATTTTTTGTTTTCCCACACAAACAATCAGAAGACGTTAAAGAAAGAGACATTTACTTCTCTAGGCCTCGCGGAAAGAAGCCTTCATATTCAGGTCCACTGGTTCTAGGTTCTGACTGGGAGGTTGGTGAGCAGCCTCCTGTTTCAAACAAAGTCAATTTATCAAAAATATCAGGGTCGGCGGCATCTAAGAGTTCATTGTCCAGAGATCAGAAAGAAAAACCAGTTTCCTTATGGCCTCCAAAAACAATTCAAGATGGGCATGGGTCCAGGGGAAGAAATATCCATGCATCTGGTCCACTACTGGTTTCATCAAACAATATGGATGAGATGCTCAAAGAGCGTGATCGGAGGTTCCAGGAATATTCAAGACGGGCACGGATTGAGAAATCTAAAGGTGAGAAAGTCCATGCGAAATAA 2001 0.4358 MGCITSKNLIVEDSTEDLRTKLTSCSKRETSEMNVSRLNSSKRVEGVRERDTLFNGVGMKASLLDKNASGSVELYDDDNVDQNGQMKMEKPGLTFLNRPSLGRILKASEGEQVAAGWPTWLSSAAGEAIEGWIPRSANTFERFFKVGQGTYSTVYKAHDLTTQKIVALKRVRFDSLDPESVKFMAREILVLRRLDHPNVIKLEGLITSQTSRSLYLVFEYMEHDLTGLSSDPSIKFSEPQVKCYMQQLLSGLDHCHSRGVLHRDIKGSNLLIDNNGILKIADWGLATFFDSNHSVPMTSRVVTLWYRPPELLLGVSHYGVAVDLWSTGCILGELYSGRPILPGKTEVEQLHKIFKLCGSPPEEYWFKLRLRHSTAFRPPHHYRRCVAETFKECPSVAVKLIETLLSVDPAHRGTAATALTSEVGGVMFLASAFFSSEPLACDPSTLPKYPPCKEIDSKLRDGATRRQGDAGEKERKVGSGVRKEKELKSFVSSKDNSESHIQFQQGQHISSSKSRSGLLNPQGEPVSGFFVFPHKQSEDVKERDIYFSRPRGKKPSYSGPLVLGSDWEVGEQPPVSNKVNLSKISGSAASKSSLSRDQKEKPVSLWPPKTIQDGHGSRGRNIHASGPLLVSSNNMDEMLKERDRRFQEYSRRARIEKSKGEKVHAK 666
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal10g0689 666 MobiDBLite consensus disorder prediction 494 520 - -
Lal10g0689 666 MobiDBLite consensus disorder prediction 575 593 - -
Lal10g0689 666 SUPERFAMILY Protein kinase-like (PK-like) 134 420 IPR011009 -
Lal10g0689 666 PANTHER CYCLIN-DEPENDENT KINASE 34 614 - -
Lal10g0689 666 Gene3D Phosphorylase Kinase; domain 1 127 222 - -
Lal10g0689 666 ProSitePatterns Protein kinases ATP-binding region signature. 146 169 IPR017441 GO:0005524
Lal10g0689 666 ProSiteProfiles Protein kinase domain profile. 140 434 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal10g0689 666 ProSitePatterns Serine/Threonine protein kinases active-site signature. 260 272 IPR008271 GO:0004672|GO:0006468
Lal10g0689 666 Gene3D Transferase(Phosphotransferase) domain 1 223 470 - -
Lal10g0689 666 MobiDBLite consensus disorder prediction 541 666 - -
Lal10g0689 666 MobiDBLite consensus disorder prediction 636 666 - -
Lal10g0689 666 SMART serkin_6 140 424 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal10g0689 666 CDD STKc_CDK9_like 140 422 - -
Lal10g0689 666 MobiDBLite consensus disorder prediction 453 493 - -
Lal10g0689 666 PANTHER CELL DIVISION PROTEIN KINASE 34 614 - -
Lal10g0689 666 MobiDBLite consensus disorder prediction 452 520 - -
Lal10g0689 666 Pfam Protein kinase domain 141 421 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal10g0689 Lal-Chr10 14686436 14692604 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal10g0689 132 475 Core Cell Cycle Gene Families AT5G10270 45.000 1.13e-102 320
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-CRK7-CDK9 Lal10g0689 Pkinase 1.2e-64 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal10g0689 - K08819 gmx:100775462 884.019
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal10g0689 10 14686436 14692604 Lal10g0689 10 14686436 14692604 ECH
Lal10g0689 10 14686436 14692604 Lal8g0777 8 5574369 5578510 LSH
Lal10g0689 10 14686436 14692604 Lal1g0462 1 2900089 2906907 PCT
Lal1g0462 1 2900089 2906907 Lal10g0689 10 14686436 14692604 PCT