Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal10g0654 ATGTACCATCATACTAGATTCAACACAAAACATTTACATGTGGCTGACCCAGGTGAGCCCGAGCCCGGGCCAACCTTAGAAGTCGGGCCTGCTTCACCTTCATCGGGTGATGATGCAAAAACTGAAGCACCATCACCCAAGAAAAGGAGGGAGATGAAGAAAAGGGTGATAACAATACCGATCGGTGATGTTGAAGGATCTAAGAGCAAAGGAGAGAATTATCCACCGTTTGATTCATGGGCATGGAGAAAGTATGGCCAAAAACCCATCAAAGGTTCCCCTTATCCAAGGGGATACTACCGATGCAGCAGTTCAAAGGGGTGCCCAGCAAGGAAGCAAGTTGAGAGAAGCCGTGTGGACCCCACAAACCTCATTGTCACCTACGCTTACGAACACAACCACTCCCTTCCACTCACCAAATCCCACTCCTCCTCCGCCGCTGCCACCGTAACAGACGCCATCACCGACTCACCAACCGAGTCTGCCGCCAAACCACCGCCGGAGGATCTGACCGTTTTCGCTAGCCATCCGGATCTCGAATTCGCCGTCGACTCAGCAGTCCTACTCAGCCACCACCACCACCACGGTTCCGAGTTCGTGTGGTTTGACGACATGGTCTCCGCCGGCGTTTTTGAAAGCCCGATCTGTGGAGTGTTGGAGGACGTGGCGCTGACGATGAGGGAGGAGGATGAGGAGGAGTCGCTTTTCGCTGATCTCGGTGAGTTGCCGGAATGTTCAGTGGTTTTCCGGCGGAGAAATATTCTTAGCGCGAAAGTAGTTCAGTGCGGTGGCGTCCCAAGATAA 804 0.5311 MYHHTRFNTKHLHVADPGEPEPGPTLEVGPASPSSGDDAKTEAPSPKKRREMKKRVITIPIGDVEGSKSKGENYPPFDSWAWRKYGQKPIKGSPYPRGYYRCSSSKGCPARKQVERSRVDPTNLIVTYAYEHNHSLPLTKSHSSSAAATVTDAITDSPTESAAKPPPEDLTVFASHPDLEFAVDSAVLLSHHHHHGSEFVWFDDMVSAGVFESPICGVLEDVALTMREEDEEESLFADLGELPECSVVFRRRNILSAKVVQCGGVPR 267
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal10g0654 267 Gene3D WRKY domain 64 138 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lal10g0654 267 PANTHER WRKY TRANSCRIPTION FACTOR 30-RELATED-RELATED 29 254 IPR044810 GO:0003700
Lal10g0654 267 PANTHER OS01G0750100 PROTEIN 29 254 - -
Lal10g0654 267 MobiDBLite consensus disorder prediction 1 73 - -
Lal10g0654 267 Pfam WRKY DNA -binding domain 78 134 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lal10g0654 267 SUPERFAMILY WRKY DNA-binding domain 73 137 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lal10g0654 267 ProSiteProfiles WRKY domain profile. 78 137 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lal10g0654 267 SMART WRKY_cls 76 136 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal10g0654 Lal-Chr10 14360968 14365468 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal10g0654 27 256 WRKY Transcription Factor Family AT3G58710 52.066 2.13e-71 218
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Lal10g0654 WRKY 2.6e-24 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal10g0654 - - gmx:100170680 403.675