Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal10g0641 ATGGCAACACTGTGGTTTTCTCTGAAAAAGTCTTTGTTGCACTGCAAATCAGATCCCTCAGATGTTCATGACCCAAAATCAAGAAAACAGTTTAACACAATCTTGACCAAGAGGTCAGGGTGTTCAAGGTCCATAGCAAATCTCAAAGATGTCATTCATGGAAGCAAAAGACATATAGAGAGGCCACAAAGTTGTAGCCCTAGATCCATAGGGAGCAGTGAGTTCATCAACCCTATAACACATGAAGTGATTCTTAGTAACTCAAGGTGTGAGCTCAAAATCACTGGCTATGGAGGAGGATTTCAAGAAGAGGTTAGTAGTAATGATAATAGTGGTGATTCAACTTTTGTTGGTACTTTAAGGCCTGGGACTCCTGGACCTGGAGGGTACCCTACAATGCATTACTTTAACCCTTCTTTTAGGACTTCATCCACTCCTCCAAAGAAACCTCCTTTCCTTTTATCAAGTAATAGGTTGTCTCTTGACACAGATTCTAATAATGGGTTTTGTAATGTGACTTGTCACAAATGTGGAGAGAGATTTAAGAAATGGGAAGTTGCTGAAGCTCACCATCTTTCCAAACATGCTGTGACTGAATTGGTGGAAGGTGATTCATCAAGAAAAATAGTTGAAATAATATGCAGGACTAGCTGGTTAAAGTCTGAAAACCAATGTGGGAGAATTGAGAGAGTTTTAAAAGTCCATAACATGCAAAAGACTTTGGCTAGGTTTGAAGAGTATAGAGAAATGGTGAAAATTAAAGCTAGCAAACTCCCAAAGAAGCATTCTAGGTGCATTGCTGATGGGAATGAACTTTTGAGATTCTATGGCACCAATGTTGCATGCTCTCTAGGTCTCAATGGCTCTTCAAGCCTATGCTTATCTGAAAAATGCTGTGTTTGTAGGATCATAAAAAATGGATTTTCTGCCAAGAATGAACTAAAAGGTGGAATAGGAGTTTTCACTACTTCAACAAGTGGTAGAGCTTTTGAATCTATTGAGGAATTGGGCCATGAACATTCACTAAGAAAAGCACTTATAGTATGTAGAGTAATTGCTGGAAGGGTTCATAGGCCTATTGAGAATATTCAGGAAATGGTAAGTCAAATAGGGTTTGATTCATTGGCTAGAAAAATTGGTCTCTATTCAAATATTGAAGAGCTTTATTTGCTTAATCCTAGAGCTCTTCTTCCATGCTTTGTGGTAATTTGTAAACCTTGA 1221 0.3841 MATLWFSLKKSLLHCKSDPSDVHDPKSRKQFNTILTKRSGCSRSIANLKDVIHGSKRHIERPQSCSPRSIGSSEFINPITHEVILSNSRCELKITGYGGGFQEEVSSNDNSGDSTFVGTLRPGTPGPGGYPTMHYFNPSFRTSSTPPKKPPFLLSSNRLSLDTDSNNGFCNVTCHKCGERFKKWEVAEAHHLSKHAVTELVEGDSSRKIVEIICRTSWLKSENQCGRIERVLKVHNMQKTLARFEEYREMVKIKASKLPKKHSRCIADGNELLRFYGTNVACSLGLNGSSSLCLSEKCCVCRIIKNGFSAKNELKGGIGVFTTSTSGRAFESIEELGHEHSLRKALIVCRVIAGRVHRPIENIQEMVSQIGFDSLARKIGLYSNIEELYLLNPRALLPCFVVICKP 406
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal10g0641 406 PANTHER C2H2-LIKE ZINC FINGER PROTEIN 2 406 - -
Lal10g0641 406 ProSitePatterns Zinc finger C2H2 type domain signature. 174 195 IPR013087 -
Lal10g0641 406 PANTHER - 2 406 - -
Lal10g0641 406 Gene3D - 187 405 - -
Lal10g0641 406 SUPERFAMILY ADP-ribosylation 197 405 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal10g0641 Lal-Chr10 14252588 14255865 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal10g0641 1 406 C2H2 Transcription Factor Family AT5G54630 62.796 0.0 530
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Lal10g0641 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal10g0641 - - gmx:100785097 670.233