Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal10g0639 ATGAAAGAGGAGTCAACAGGAGTAATCATTGGGATTTCCATAGGTGTGGTTATTGGACTTGTTTTGGCAATTACTGCATTGTTATGTCTTCGATATCGTCGGAAGCGATCGCAGATAGGCAATAGCAGTTCCCGGAGAACGACTGTTCTTCGCATCCACACAAATGGTGCTGATTCATGTACAGTTCTATCAGACTCAACCTTAAGTCCAGAATCACCTTTGAAGTCTGTACGCAACGGCACATCCTTCTGCCTTGATGGATTTAAGAGGAGCAGTGTAGTTTCAGCATTTGGAATAACAGAATATTCATACAAGGATTTGCAAAAGGCAACATATAATTTTACAACACTCATAGGACAAGGTGCATTTGGTCCTGTTTATAAAGCTCAGATGTCTACTGGTGAGACTTTTGCTGTCAAAGTTCTTGCAACTAATTCTAAGGAAGGGGAGAAAGAATTTGGCACAGAGGTTATGTTGTTGGGAAGGTTACACCATAGAAACCTGGTCAATTTGGTTGGATATTCTGCTGAAAAAGGGCAACATATGCTTGTATATGTCTACATGAGTAAAGGCAACTTGGCTTCCCACTTGTACAGTAATGAGAATGGGACACTAGACTGGGATTTGAGGCTCCATATAGCTTTAGATGTAGCAAGGGGCTTGGTGTATCTTCATGATGGGGCAATTCCTCCTGTAATCCATAGAGATATCAAATCTTGCAATATTCTCCTAGACGAGTCCATGGGAGCCAGGTCATGTAGTGTTGGTTTTGATGATTCTTTTGTTGGAAATTTTTATTGTTGGAAAGGAGAAGAGATGGTGGATAAACATGTAGCTATTAGGGGTACTTTTGGCTATCTTGACCCTGAGTATATATCTTCAGGGAAATTCACCAAGAAAAGTGATGTATATAGTTATGGAGTGTTTCTCTTTGAACTTATAGCTGGCAGAAATCCTCAGCAGGGTCTTATGGAATATGTTGAGCTTGGAAGATCTCTTTCTCCCTACAAACTACAAAGATAA 1023 0.4037 MKEESTGVIIGISIGVVIGLVLAITALLCLRYRRKRSQIGNSSSRRTTVLRIHTNGADSCTVLSDSTLSPESPLKSVRNGTSFCLDGFKRSSVVSAFGITEYSYKDLQKATYNFTTLIGQGAFGPVYKAQMSTGETFAVKVLATNSKEGEKEFGTEVMLLGRLHHRNLVNLVGYSAEKGQHMLVYVYMSKGNLASHLYSNENGTLDWDLRLHIALDVARGLVYLHDGAIPPVIHRDIKSCNILLDESMGARSCSVGFDDSFVGNFYCWKGEEMVDKHVAIRGTFGYLDPEYISSGKFTKKSDVYSYGVFLFELIAGRNPQQGLMEYVELGRSLSPYKLQR 340
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal10g0639 340 PANTHER CALCIUM/CALMODULIN-REGULATED RECEPTOR-LIKE KINASE 1 5 330 - -
Lal10g0639 340 Pfam Protein tyrosine and serine/threonine kinase 114 325 IPR001245 GO:0004672|GO:0006468
Lal10g0639 340 SMART serkin_6 112 337 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal10g0639 340 Gene3D Transferase(Phosphotransferase) domain 1 188 337 - -
Lal10g0639 340 PANTHER OS01G0253100 PROTEIN 5 330 IPR045271 GO:0004714|GO:0006468
Lal10g0639 340 ProSitePatterns Serine/Threonine protein kinases active-site signature. 232 244 IPR008271 GO:0004672|GO:0006468
Lal10g0639 340 ProSiteProfiles Protein kinase domain profile. 112 340 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal10g0639 340 Gene3D Phosphorylase Kinase; domain 1 86 187 - -
Lal10g0639 340 SUPERFAMILY Protein kinase-like (PK-like) 97 324 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal10g0639 Lal-Chr10 14229786 14235422 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal10g0639 95 333 Receptor kinase-like Gene Family AT3G19300 45.188 8.30e-63 209
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-2 Lal10g0639 PK_Tyr_Ser-Thr 2.8e-39 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal10g0639 - - gmx:100799586 491.115
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal10g0639 10 14229786 14235422 Lal8g0872 8 6329657 6334066 LSH
Lal10g0639 10 14229786 14235422 Lal2g0538 2 3239765 3244714 PCT
Lal10g0639 10 14229786 14235422 Lal9g0474 9 3147326 3151561 PCT
Lal2g0538 2 3239765 3244714 Lal10g0639 10 14229786 14235422 PCT
Lal9g0474 9 3147326 3151561 Lal10g0639 10 14229786 14235422 PCT