Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal10g0619 ATGTTATTAATGGGTAGCAGAACTACAAAGATTAACGTTAACAACCCTGAGGATATTGACATGCCAAGCTACGCTCCTTCATTGCCTTCTTCTAATTCCATGGGCACTGAAGCAAACAATGTTCATCCTTCTCGAATTTCTGAATTTGGAGCCCTTGAGCAATCTCTTGGATTCCGTGTTGAGGATGCCATGAATCTTAGCCGAAATCCAATGTTTAGTCAAATGAAATCAAATAGCCAAGTTCTAGGTGCTGATGTTCAATTTGGTGCTTTGAGTAAATCATTTGCAACCTCGGATGTTAATCTCTCCGCTGCAATTTCTGGGACTCAGACATTGCCATTACAAAGAGACTCACAATCAAATCCGGCTCTGACAGCTGTTGGGCATCGTGAGAACTGGGGAGAGTCCAACATGGCAGATGCAAGTGCTGATACTTCAACGGATGATACAGATGATAAAAATCAGAGGGCTGAAAGGGGTGAATCCAGTGATAGATCAAAAGATAAATCCGATCAAAAGACCTTACGACGGCTAGCTCAAAATCGTGAGGCTGCCAGAAAAAGCCGACTGAGGAAAAAAGCATATGTGCAACAATTAGAAAGTAGTAGGCTGAAACTTACGCAACTTGAGCAGGAGCTCCAGCGAGCCCGCCAGCAGGGAATATTTATTTCAAGCACGGGAGAGCAGACTAATTCAATGAGTGGAAATGGTGCTATGGCATTTGATGTAGAGTATGCACGATGGTTAGAAGAACATAATAAGCAAGCCAATGAGCTAAGGGCTGCAATAAACTCTCATGCTGGAGATATTGAACTTCGTACCATCGTCGACAATTTCATGACACAATATGATGATATATTCAGGCTGAAAGGTATTGCAGCAAAAGCCGATGTTTTCCACATTCTGTCAGGAATGTGGAAGACTCCAGCTGAGAGGTGTTTCATGTGGATTGGAGGCTTTCGCTCATCTGAGCTCCTCAAAGTGAGAAACTTCTCGTCTATTGATCTCCTTCTTGTAAGTCAATTGGAGCCTTTAACTGAGCAACAAGTGATGGGCATATACAACTTGCAGCAGTCATCGCAGCAAGCAGAAGATGCTTTGTCCCAAGGAATGGATGCATTGCAACAATCACTAGCCGAGACATTGGCTAATGGTTCACCCAGCCCTTCCGGCTCTTCAGGAAATGTGGCAAATTATATGGGGCAAATGGCTGTGGCCATGGGAAAGCTTGGTACTCTTGAGGGGTTTCTTCGTCAGGCTGATAATCTGCGGCAGCAAACATTACAACAAATGCTTAGGATATTAACAACCAGGCAATCAGCCCGAGCTCTCCTCGCAATAAGCGATTACTTCTCCCGACTGCGAGCCCTAAGTTCTCTATGGCTTGCCAGGCCAAGGGACTGA 1404 0.4459 MLLMGSRTTKINVNNPEDIDMPSYAPSLPSSNSMGTEANNVHPSRISEFGALEQSLGFRVEDAMNLSRNPMFSQMKSNSQVLGADVQFGALSKSFATSDVNLSAAISGTQTLPLQRDSQSNPALTAVGHRENWGESNMADASADTSTDDTDDKNQRAERGESSDRSKDKSDQKTLRRLAQNREAARKSRLRKKAYVQQLESSRLKLTQLEQELQRARQQGIFISSTGEQTNSMSGNGAMAFDVEYARWLEEHNKQANELRAAINSHAGDIELRTIVDNFMTQYDDIFRLKGIAAKADVFHILSGMWKTPAERCFMWIGGFRSSELLKVRNFSSIDLLLVSQLEPLTEQQVMGIYNLQQSSQQAEDALSQGMDALQQSLAETLANGSPSPSGSSGNVANYMGQMAVAMGKLGTLEGFLRQADNLRQQTLQQMLRILTTRQSARALLAISDYFSRLRALSSLWLARPRD 467
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal10g0619 467 Gene3D - 172 224 - -
Lal10g0619 467 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 176 191 IPR004827 GO:0003700|GO:0006355
Lal10g0619 467 PANTHER TGACG-SEQUENCE-SPECIFIC DNA-BINDING PROTEIN TGA-2.1 60 467 - -
Lal10g0619 467 CDD bZIP_HBP1b-like 173 225 - -
Lal10g0619 467 Pfam Seed dormancy control 256 328 IPR025422 GO:0006351|GO:0043565
Lal10g0619 467 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 171 215 IPR004827 GO:0003700|GO:0006355
Lal10g0619 467 MobiDBLite consensus disorder prediction 128 175 - -
Lal10g0619 467 Coils Coil 249 269 - -
Lal10g0619 467 Pfam Basic region leucine zipper 169 215 IPR004827 GO:0003700|GO:0006355
Lal10g0619 467 PANTHER TRANSCRIPTION FACTOR TGA9 60 467 - -
Lal10g0619 467 SUPERFAMILY Leucine zipper domain 173 216 IPR046347 GO:0003700|GO:0006355
Lal10g0619 467 MobiDBLite consensus disorder prediction 25 41 - -
Lal10g0619 467 MobiDBLite consensus disorder prediction 146 175 - -
Lal10g0619 467 ProSiteProfiles DOG1 domain profile. 238 464 IPR025422 GO:0006351|GO:0043565
Lal10g0619 467 SMART brlzneu 169 232 IPR004827 GO:0003700|GO:0006355
Lal10g0619 467 Coils Coil 192 219 - -
Lal10g0619 467 MobiDBLite consensus disorder prediction 13 41 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal10g0619 Lal-Chr10 13966162 13972669 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal10g0619 138 467 bZIP Transcription Factor Family AT3G12250 72.353 9.02e-168 474
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Lal10g0619 DOG1 9.9e-29 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal10g0619 K14431 - gmx:778136 705.671
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal8g0887 8 6487686 6493609 Lal10g0619 10 13966162 13972669 LSH