Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal10g0610 ATGGGACTGTGTCATGGAAAACCAATTGAAACTTCACAAACTCAAAGAGAAAACCAACCATTCCAAAATGACAATGAGGTTTTGCCACTGCCACCAAGGTCTTCATCAAAGTTTCCCTTTTACAGTCCAAGCCCTTTACATAAATTCTTCAAAAACTCACCTTCAAACAGCACTCCTTCTAGTGTGAGTTCAACCCCTCTGCGCCTCTTCAAGAGGCCATTTCCTCCTCCATCCCCGGCCAAACACATAAAGGCACTGCTCGCGAGGCGCCACGGTTCGGTGAAGCCTAATGAAGCCACAATTCCTGAAGGAAATGAGTGTGAGGTTGGTTTGGATAAGAGTTTTGGGTTTTCCAAGCAGTTTGAGGTTCATTATGAACTTGGAGAAGAAGTTGGGCGTGGCCATTTTGGATACACTTGTTCTGCCAAGGGAAAGAAGGGAAGCTTGAAGGGGCATGAGGTTGCTGTCAAAGTCATTCCAAAATCAAAGCTGTCAATTATGAAAGTCAGCAGTGTGCATTTTGTTCTTATGAAAATCGGCGATGTTTGGCAGATGACAACCGCAATTGCTATAGAGGATGTGAGGAGAGAAGTAAAGATATTGCGAGCTCTAACCGGGCATAAGAATCTGGTGAAATTCTATGAAGCTTATGAGGATGACAACAATGTTTATATAGTAATGGAGTTATGTGAAGGAGGTGAACTTCTAGATAAGATCCTTTCCAGGGGTGGAAAGTACTCAGAAGAGGATGCCAAGGTTGTTATGGTTCAGATATTAAGTGTGGTAGCTTTCTGTCATCTACAAGGCGTTGTTCACCGCGATTTGAAGCCAGAGAATTTTCTTTTTACTTCTAAGGATGAAAATTCCACATTGAAGGCCATTGATTTTGGTTTATCTGACTATGTAAAACCAGATGAAAGGTTGAATGATATTGTGGGAAGTGCATATTATGTAGCTCCTGAAGTTTTGCATAGATCTTATGGAACAGAAGCAGATATGTGGAGCATTGGTGTAATTGCTTATATTCTTTTATGTGGAAGCCGACCCTTCTGGGCCCGTACCGAATCTGGCATATTTCGAGCTGTTTTGAAGGCAGATCCAAGTTTTGATGAAGGTCCTTGGCCTTCTTTATCAGCTCATGCAATTGATTTTGTGAAGCGACTCTTGAACAAGGATTATCGTAAAAGACTAACTGCAGCTCAGGCTCTCAGTCATCCATGGCTGGCAAATCATTGTGATGATATGAAGATACCTTTTGATATGATAATCCCAAAGCTTGTTAATGCTTACATATGCTCATCTTCTCTACGCAAAACAGCATTAGGGGCTCTTGCAAAGACATTAACATTAGTGCAACTAGCTTATCTCAAGGAACAATTTACTCTGTTGGGACCAAACAAAAGTGGCCTAATCTCTATGCCGAACTTCAAGACGGCTATTTTAAGGAGCGCCACCGATGCTTCAAAGGATTCACGAGTCTTGGATTATGTGAACATGGTTAGTTCAATCCAATATCAGAAAGTCGATTTTGAGGAATTTTGTGCTGCTGCTATAAGTGTGCATCAACTAGAGGGAATGGTGAGCTGGGAGCAACATGCAAGGAGTGCCTATGAGCTCTTTGAAAAGGATGGAAATAGACCAATTATGGTTGAAGAGCTTGCCTCGGAACTCTGGCTCAGTCCATCAGTGCCAGTTCATGTGGTACTCCAAGATTGGATACGACACTCGGACGGGAAGCTTAGTTTCTTGGGGTTTGTCAGACTTCTGCATGGAGTTTCTTCGCGCACACTTCAGAAGGCTTGA 1803 0.426 MGLCHGKPIETSQTQRENQPFQNDNEVLPLPPRSSSKFPFYSPSPLHKFFKNSPSNSTPSSVSSTPLRLFKRPFPPPSPAKHIKALLARRHGSVKPNEATIPEGNECEVGLDKSFGFSKQFEVHYELGEEVGRGHFGYTCSAKGKKGSLKGHEVAVKVIPKSKLSIMKVSSVHFVLMKIGDVWQMTTAIAIEDVRREVKILRALTGHKNLVKFYEAYEDDNNVYIVMELCEGGELLDKILSRGGKYSEEDAKVVMVQILSVVAFCHLQGVVHRDLKPENFLFTSKDENSTLKAIDFGLSDYVKPDERLNDIVGSAYYVAPEVLHRSYGTEADMWSIGVIAYILLCGSRPFWARTESGIFRAVLKADPSFDEGPWPSLSAHAIDFVKRLLNKDYRKRLTAAQALSHPWLANHCDDMKIPFDMIIPKLVNAYICSSSLRKTALGALAKTLTLVQLAYLKEQFTLLGPNKSGLISMPNFKTAILRSATDASKDSRVLDYVNMVSSIQYQKVDFEEFCAAAISVHQLEGMVSWEQHARSAYELFEKDGNRPIMVEELASELWLSPSVPVHVVLQDWIRHSDGKLSFLGFVRLLHGVSSRTLQKA 600
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal10g0610 600 CDD STKc_CAMK 124 407 - -
Lal10g0610 600 SMART serkin_6 125 408 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal10g0610 600 ProSiteProfiles Protein kinase domain profile. 125 408 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal10g0610 600 SUPERFAMILY EF-hand 438 591 IPR011992 -
Lal10g0610 600 Gene3D Transferase(Phosphotransferase) domain 1 236 421 - -
Lal10g0610 600 MobiDBLite consensus disorder prediction 8 30 - -
Lal10g0610 600 Gene3D - 434 588 - -
Lal10g0610 600 PANTHER CDPK-RELATED KINASE 1 25 595 - -
Lal10g0610 600 Gene3D - 433 518 - -
Lal10g0610 600 SUPERFAMILY Protein kinase-like (PK-like) 124 428 IPR011009 -
Lal10g0610 600 ProSitePatterns Serine/Threonine protein kinases active-site signature. 270 282 IPR008271 GO:0004672|GO:0006468
Lal10g0610 600 Pfam Protein kinase domain 125 408 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal10g0610 600 Gene3D Phosphorylase Kinase; domain 1 127 235 - -
Lal10g0610 600 ProSitePatterns Protein kinases ATP-binding region signature. 131 157 IPR017441 GO:0005524
Lal10g0610 600 PANTHER SERINE/THREONINE-PROTEIN KINASE 25 595 - -
Lal10g0610 600 MobiDBLite consensus disorder prediction 1 39 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal10g0610 Lal-Chr10 13860972 13867401 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal10g0610 1 598 EF-hand Containing Proteins AT3G50530 64.571 0.0 830
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Lal10g0610 Pkinase 1.4e-65 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal10g0610 - - gmx:100783262 968.378