Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal10g0595 ATGGCCAAACGCTTGATTCCTCTGTTCAATCGTGTTTTGGTCGAGAAAATCGTTCCTCCTTCCAAAACCAACGCTGGTATTTTGTTACCTGAGAAATCCACTAAGTTGAATTCTGGAAAAGTTATTGCCACTGGCCCTGGCACTTGCAGCAAGGACGGGAAACTAATTCCCGTGTCCGTAAAGGAAGGTGACACTGTTCTTTTGCCTGAATATGGGGGATCTGAGGTGAAGCTTGGTACCATCTATATAGAGATGATGATATATTGGGGACCCTGCATGATTGATCTCATAGTAATCATTGGTGAACTTAAAACCATGCTGTTGCAATTTGTGTTAGGTGTTTTGCCATTTGAGCATCTTCTTTCTGTGCTAATTTTCATTTGA 384 0.4193 MAKRLIPLFNRVLVEKIVPPSKTNAGILLPEKSTKLNSGKVIATGPGTCSKDGKLIPVSVKEGDTVLLPEYGGSEVKLGTIYIEMMIYWGPCMIDLIVIIGELKTMLLQFVLGVLPFEHLLSVLIFI 127
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal10g0595 127 CDD cpn10 4 79 IPR020818 GO:0005524|GO:0006457|GO:0140662
Lal10g0595 127 Gene3D GroES chaperonin 1 87 IPR037124 GO:0006457
Lal10g0595 127 PANTHER GROES-LIKE FAMILY PROTEIN 1 80 - -
Lal10g0595 127 PANTHER 10 KDA HEAT SHOCK PROTEIN 1 80 IPR020818 GO:0005524|GO:0006457|GO:0140662
Lal10g0595 127 Pfam Chaperonin 10 Kd subunit 5 78 IPR020818 GO:0005524|GO:0006457|GO:0140662
Lal10g0595 127 PRINTS 10kDa chaperonin signature 5 20 IPR020818 GO:0005524|GO:0006457|GO:0140662
Lal10g0595 127 PRINTS 10kDa chaperonin signature 26 47 IPR020818 GO:0005524|GO:0006457|GO:0140662
Lal10g0595 127 PRINTS 10kDa chaperonin signature 61 73 IPR020818 GO:0005524|GO:0006457|GO:0140662
Lal10g0595 127 SUPERFAMILY GroES-like 4 79 IPR011032 -
Lal10g0595 127 SMART Cpn10_2 4 100 IPR020818 GO:0005524|GO:0006457|GO:0140662
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal10g0595 Lal-Chr10 13673825 13677446 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal10g0595 3 85 Calmodulin-binding Proteins AT5G20720 39.535 4.46e-10 53.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal10g0595 K04078 - gmx:100306384 142.51
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal8g0900 8 6630169 6632724 Lal10g0595 10 13673825 13677446 LSH