Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal10g0588 ATGCCTGAATCATTCATCGCCGGAGAAACACAACCGCCACCGGATCCGCCGTTAATGTCTACCGATCTCGGTTTCGACGATTTCACCGCCGCGTTCGATAACGTCCCCATCCCCTCCGTTGACTCGCTTTTCGATGACACTGCGTTACCCACTGAAGCATTTGCCTCAGATCTCGATTTCGCCATGGATTTCGAGATCACGTTTGATGACATGGACAATCTTTGCATTCCCTCCGACGCCGAGGATTTTCTCCTTCTCGATGCTTGTAACTCTAATGGCGGTTCAATTTCGCTGATCAACGATGATCTCGTTGATTCTAATGCTAACAGTTCCAATTACGACGTCGTTAATCATGATTCGCCGGAATCCGGCAATTGTGAAGTTTCCGGCGATTGTAGCTCCGGCGATTCTAGGTTTTTCAATTTGGAAGTGCCGAATTCCGTTGGTTTCAAGAAGGAGCTTTCTCCGGCTGGTAATTCCGGTAATCAGGATTCGCTGAACTCTGTTGATGTTAAAGTTTCAAGCTTTCCGTCACCTGAGTCTGAATTATGCGATCAGGAAGAATATTCGAATGAACCCGTTTCGTCTCAGGGTTCGGGGAATGGTGGGTTGGGTTTATATGAAGCTATGAACTCGCCTTCACCTGTTTCTGACCGTTACATAGACATTTCATCTCATGAAAATGAAAATGCTGATAAGGGTATAATAAAAACGGAGGAAATTGGAAAGGGTGGTGATTTAAAGAGGAAGAAAGAACAAAGTGAAGAAAGTGCTGAAACTAGAACTACCAAATATAGAAGATCATCATTATCATCATCATCATCTGTGTCTGTGGAGAACAAGATCCAACAATGTGAATCTGGTATTGATGATGAGGATGAGAAAAGGAAGGCAAGGTTGATGAGGAATAGGGAAAGTGCACAACTTTCTAGGCAGAGGAAGAAGCATTATGTGGAGGAGCTTGAGGAGAAAGTGAAGGCAATGAATTCAACCATTGCTGATTTGAGTAGCAAGATTTCATTTGTTATGGCTGAGAATGCTAATATGAGGCAGCAATTGGGTGCTGCTGCTGGTGGGATGTATCCTCATCCTCCAATGGCTCCCATGCCTTATCCATGGATTCCTTGTGCTCCTTATGTTGTTAAGCCTCAAGGGTCTCAGGTTCCACTTGTTCCTATTCCCAGATTGAGGCCTCAACGGCCCGCGGCGGCGGCGAAGAGTAAAAAGTCTGAGGTGAAAACTAAGAAGGTTGCTAGCATTAGTTTCTTGGGTTTGTTTTTCTTTATCATGCTTTTTGGTGGGGTTTTTTCTCTGGTTGGTGTTAGGTTTGGAGGTTTAGTGAACAATCTAACAGGTAGGTCTAGCTATGTTAGTGATAGGTCGTTGTATGGTTTGGGTCGAGGTGGAGGGAAGGTTTGGCCTGTAAGTGGTGGTCATGGGAATGCGTCTGTAAGGGATGAGGATGTAGAATTTTCTGATGGAAAGTTTAGCATTTCTGAGAGAGGAAGGAAACTAGAAGAACGGCATGACCCGCATGACCTGCATTCCAATGAATCTGTTTGTACGGGTGGCAATGCCAGTGAACTGCTTGTTGCATCTTTGTATGTTCCTAGGAATGATAAGCTGGTGAAGATTGATGGAAATTTGATAATCCATTCCATCATGGCCAGTGAGAAAACTATGGCATCTCAGGCAGTGGCACAGGTGAAGAAAGAGACTGGTTTGGCCATTCCTAATTCTGCATTGGCTATTCCTGAAGCTGGAAGAAATAATGGTCAACATCCTCATGCGTATAAGGTTTCACCCGAACAGAGGAAGGCTGTTGGCTCTGGTTCGACCGAAACTTTGAAGGACCATATCAAGTCCAGTGCAACTGATGGTAAAATTCAACAGTGGTTTCGTGAAGGACTTGCAGGTCCAATGCTAAGTTCTGGCATGTGTACAGAAGTTTTCCAGTTTGATGTATCTCCAATTCCTGGAGCTATAGTTCCAGCAACATCTGTAGCCAACATTTCTTCAAAAACCGGTAAAAACACTACCGCTCTTAACAAGGGAAGGAACAGAAGAATCCTCCCTGAATCCAAACTGAACCTAACTGAAGATCCTGTCAGAAATTCACAGAATGATCCCCTCCATGGTAATAATTCTTCTATGGTCGTTTCAGTGCTTGTCGATCCCAAAGAAGCCGCATACGATAATGTCACACCAAAGTCGCTCTCTCGGATTTTTGTAGTTGTACTTATGGATAGTGTCAAGTATGTCACTTACTCATGTGGTCTTCCTTTTGCTTCTCCTCATTTGGTGTCTGCTTAA 2313 0.4427 MPESFIAGETQPPPDPPLMSTDLGFDDFTAAFDNVPIPSVDSLFDDTALPTEAFASDLDFAMDFEITFDDMDNLCIPSDAEDFLLLDACNSNGGSISLINDDLVDSNANSSNYDVVNHDSPESGNCEVSGDCSSGDSRFFNLEVPNSVGFKKELSPAGNSGNQDSLNSVDVKVSSFPSPESELCDQEEYSNEPVSSQGSGNGGLGLYEAMNSPSPVSDRYIDISSHENENADKGIIKTEEIGKGGDLKRKKEQSEESAETRTTKYRRSSLSSSSSVSVENKIQQCESGIDDEDEKRKARLMRNRESAQLSRQRKKHYVEELEEKVKAMNSTIADLSSKISFVMAENANMRQQLGAAAGGMYPHPPMAPMPYPWIPCAPYVVKPQGSQVPLVPIPRLRPQRPAAAAKSKKSEVKTKKVASISFLGLFFFIMLFGGVFSLVGVRFGGLVNNLTGRSSYVSDRSLYGLGRGGGKVWPVSGGHGNASVRDEDVEFSDGKFSISERGRKLEERHDPHDLHSNESVCTGGNASELLVASLYVPRNDKLVKIDGNLIIHSIMASEKTMASQAVAQVKKETGLAIPNSALAIPEAGRNNGQHPHAYKVSPEQRKAVGSGSTETLKDHIKSSATDGKIQQWFREGLAGPMLSSGMCTEVFQFDVSPIPGAIVPATSVANISSKTGKNTTALNKGRNRRILPESKLNLTEDPVRNSQNDPLHGNNSSMVVSVLVDPKEAAYDNVTPKSLSRIFVVVLMDSVKYVTYSCGLPFASPHLVSA 770
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal10g0588 770 SUPERFAMILY Leucine zipper domain 295 353 IPR046347 GO:0003700|GO:0006355
Lal10g0588 770 MobiDBLite consensus disorder prediction 264 284 - -
Lal10g0588 770 MobiDBLite consensus disorder prediction 588 607 - -
Lal10g0588 770 Pfam bZIP transcription factor 294 353 IPR004827 GO:0003700|GO:0006355
Lal10g0588 770 SMART brlzneu 291 355 IPR004827 GO:0003700|GO:0006355
Lal10g0588 770 CDD bZIP_HY5-like 296 347 - -
Lal10g0588 770 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 293 356 IPR004827 GO:0003700|GO:0006355
Lal10g0588 770 Gene3D - 293 356 - -
Lal10g0588 770 Coils Coil 318 338 - -
Lal10g0588 770 MobiDBLite consensus disorder prediction 188 202 - -
Lal10g0588 770 PANTHER BASIC-LEUCINE ZIPPER TRANSCRIPTION FACTOR F-RELATED 14 769 - -
Lal10g0588 770 MobiDBLite consensus disorder prediction 226 295 - -
Lal10g0588 770 MobiDBLite consensus disorder prediction 156 181 - -
Lal10g0588 770 PANTHER BASIC-LEUCINE ZIPPER TRANSCRIPTION FACTOR F-RELATED 14 769 - -
Lal10g0588 770 MobiDBLite consensus disorder prediction 226 263 - -
Lal10g0588 770 MobiDBLite consensus disorder prediction 153 211 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal10g0588 Lal-Chr10 13552270 13555609 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal10g0588 32 770 bZIP Transcription Factor Family AT2G40950 44.974 5.64e-150 454
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Lal10g0588 bZIP_1 9.7e-13 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal10g0588 K25783 - gmx:100101871 759.985
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal8g0911 8 6772958 6776652 Lal10g0588 10 13552270 13555609 LSH